Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, plastid, vacuole, cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 1
- mitochondrion 1
- vacuole 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU7Hr1G078490.1 | Barley | cytosol, plasma membrane, plastid, vacuole | 96.83 | 96.4 |
| TraesCS7A01G327900.1 | Wheat | plasma membrane | 95.93 | 95.07 |
| TraesCS7B01G228600.1 | Wheat | cytosol, plasma membrane, plastid, vacuole | 95.48 | 95.05 |
| Zm00001d052757_P001 | Maize | endoplasmic reticulum, plasma membrane, vacuole | 65.61 | 65.32 |
| EES13180 | Sorghum | plastid | 66.06 | 62.13 |
| Os08t0101900-00 | Rice | cytosol, peroxisome, vacuole | 47.96 | 55.5 |
| GSMUA_Achr8P07780_001 | Banana | plasma membrane | 50.68 | 54.37 |
| VIT_06s0080g00840.t01 | Wine grape | endoplasmic reticulum, plasma membrane, vacuole | 47.06 | 51.74 |
| TraesCS2D01G379300.1 | Wheat | cytosol, plasma membrane, plastid, vacuole | 59.73 | 51.36 |
| GSMUA_Achr3P22600_001 | Banana | cytosol, plasma membrane, vacuole | 52.49 | 51.33 |
| TraesCS7D01G190400.1 | Wheat | endoplasmic reticulum, plasma membrane, vacuole | 41.63 | 50.27 |
| VIT_08s0007g02880.t01 | Wine grape | cytosol, plasma membrane, vacuole | 47.51 | 50.24 |
| Solyc06g074230.2.1 | Tomato | cytosol, plasma membrane, plastid, vacuole | 45.7 | 48.1 |
| PGSC0003DMT400015067 | Potato | plasma membrane | 45.7 | 47.87 |
| KRH22659 | Soybean | cytosol, peroxisome, plasma membrane | 41.63 | 42.2 |
| KRH26660 | Soybean | cytosol, plasma membrane, plastid | 40.72 | 41.28 |
| KRG94419 | Soybean | cytosol, peroxisome, plasma membrane | 37.56 | 38.43 |
Protein Annotations
| EnsemblPlants:TraesCS7D01G324700.1 | EnsemblPlantsGene:TraesCS7D01G324700 | InterPro:CASP/CASPL | InterPro:CASP_dom | PANTHER:PTHR11615 | PANTHER:PTHR11615:SF215 |
| PFAM:PF04535 | SEG:seg | TIGRFAMs:TIGR01569 | TMHMM:TMhelix | MapMan:35.1 | : |
Description
No Description!
Coordinates
chr7D:-:414489362..414490027
Molecular Weight (calculated)
23388.7 Da
IEP (calculated)
9.504
GRAVY (calculated)
0.657
Length
221 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSTNEATVI HMDDTTGKAP ATAAPPPAAA PAPVQQQRKS GGGVPFILRS GAEGFRRCMA FVDLLLRVAA FGPTLAAAIS TGTSDETLSV FTEFFQFRAR
101: FDDFPAFTFF MVANAVAAGY LVLSLPFSIV GIIRPKATGI RLLLLVCDTV MVVLVTAAAS AAAAIVYVAH EGSRRANWAP ICMQFHGFCQ RTSGAVVASF
201: LAVLVFIVLV LLSACAIRRQ R
101: FDDFPAFTFF MVANAVAAGY LVLSLPFSIV GIIRPKATGI RLLLLVCDTV MVVLVTAAAS AAAAIVYVAH EGSRRANWAP ICMQFHGFCQ RTSGAVVASF
201: LAVLVFIVLV LLSACAIRRQ R
001: MKSDSIAVDV PAESSSVIKG KAPLLGLARD HTGSGGYKRG LSIFDFLLRL AAIVAALAAA ATMGTSDETL PFFTQFLQFE ASYDDLPTFQ FFVVAIAIVA
101: GYLVLSLPFS VVTIVRPLAV APRLLLLVLD TAALALDTAA ASAAAAIVYL AHNGNTNTNW LPICQQFGDF CQKTSGAVVS AFASVTFLAI LVVISGVSLK
201: RP
101: GYLVLSLPFS VVTIVRPLAV APRLLLLVLD TAALALDTAA ASAAAAIVYL AHNGNTNTNW LPICQQFGDF CQKTSGAVVS AFASVTFLAI LVVISGVSLK
201: RP
Arabidopsis Description
CASP4CASP-like protein [Source:UniProtKB/TrEMBL;Acc:A0A178UFD9]
SUBAcon: [plasma membrane,vacuole,cytosol]
SUBAcon: [plasma membrane,vacuole,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.