Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, plastid, vacuole, cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 1
- vacuole 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G324700.1 | Wheat | cytosol, plasma membrane, plastid, vacuole | 96.4 | 96.83 |
| TraesCS7B01G228600.1 | Wheat | cytosol, plasma membrane, plastid, vacuole | 96.4 | 96.4 |
| TraesCS7A01G327900.1 | Wheat | plasma membrane | 95.5 | 95.07 |
| Zm00001d052757_P001 | Maize | endoplasmic reticulum, plasma membrane, vacuole | 66.22 | 66.22 |
| EES13180 | Sorghum | plastid | 66.22 | 62.55 |
| Os08t0101900-00 | Rice | cytosol, peroxisome, vacuole | 48.2 | 56.02 |
| GSMUA_Achr8P07780_001 | Banana | plasma membrane | 50.45 | 54.37 |
| VIT_06s0080g00840.t01 | Wine grape | endoplasmic reticulum, plasma membrane, vacuole | 47.3 | 52.24 |
| GSMUA_Achr3P22600_001 | Banana | cytosol, plasma membrane, vacuole | 52.25 | 51.33 |
| HORVU2Hr1G089180.1 | Barley | plastid | 59.01 | 50.58 |
| VIT_08s0007g02880.t01 | Wine grape | cytosol, plasma membrane, vacuole | 46.4 | 49.28 |
| Solyc06g074230.2.1 | Tomato | cytosol, plasma membrane, plastid, vacuole | 46.4 | 49.05 |
| PGSC0003DMT400015067 | Potato | plasma membrane | 45.95 | 48.34 |
| KRH22659 | Soybean | cytosol, peroxisome, plasma membrane | 41.44 | 42.2 |
| KRH26660 | Soybean | cytosol, plasma membrane, plastid | 40.54 | 41.28 |
| KRG94419 | Soybean | cytosol, peroxisome, plasma membrane | 37.39 | 38.43 |
| HORVU7Hr1G038470.2 | Barley | endoplasmic reticulum, plasma membrane, plastid, vacuole | 39.64 | 35.92 |
Protein Annotations
| EnsemblPlants:HORVU7Hr1G078490.1 | EnsemblPlantsGene:HORVU7Hr1G078490 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 | GO:GO:0016020 |
| GO:GO:0016021 | InterPro:CASP/CASPL | InterPro:CASP_dom | ncoils:Coil | PANTHER:PTHR11615 | PANTHER:PTHR11615:SF215 |
| PFAM:PF04535 | SEG:seg | TIGRFAMs:TIGR01569 | TMHMM:TMhelix | UniParc:UPI000B47563D | UniProt:A0A287X0C7 |
| MapMan:35.1 | : | : | : | : | : |
Description
CASP-like protein [Source:UniProtKB/TrEMBL;Acc:A0A287X0C7]
Coordinates
chrchr7H:-:460814348..460816351
Molecular Weight (calculated)
23577.0 Da
IEP (calculated)
9.504
GRAVY (calculated)
0.673
Length
222 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSTNEATVI HMDDTTGKAP VTSAPPPAAA AAPVQQQQRK SGGGVPFILR SGAEGFRRCM AFVDLLLRVV AFGPTLAAAI STGTSDETLS VFTEFFQFRA
101: RFDDFPAFTF FMVANAVAAG YLVLSLPFSI VGIIRPKATG VRLLLLVCDT VMVVLVTAAA SAAAAIVYVA HEGSRRANWV PICMQFHGFC QRTSGAVVAS
201: FLAVLVFIVL VLLSACAIRR QR
101: RFDDFPAFTF FMVANAVAAG YLVLSLPFSI VGIIRPKATG VRLLLLVCDT VMVVLVTAAA SAAAAIVYVA HEGSRRANWV PICMQFHGFC QRTSGAVVAS
201: FLAVLVFIVL VLLSACAIRR QR
001: MKSDSIAVDV PAESSSVIKG KAPLLGLARD HTGSGGYKRG LSIFDFLLRL AAIVAALAAA ATMGTSDETL PFFTQFLQFE ASYDDLPTFQ FFVVAIAIVA
101: GYLVLSLPFS VVTIVRPLAV APRLLLLVLD TAALALDTAA ASAAAAIVYL AHNGNTNTNW LPICQQFGDF CQKTSGAVVS AFASVTFLAI LVVISGVSLK
201: RP
101: GYLVLSLPFS VVTIVRPLAV APRLLLLVLD TAALALDTAA ASAAAAIVYL AHNGNTNTNW LPICQQFGDF CQKTSGAVVS AFASVTFLAI LVVISGVSLK
201: RP
Arabidopsis Description
CASP4CASP-like protein [Source:UniProtKB/TrEMBL;Acc:A0A178UFD9]
SUBAcon: [plasma membrane,vacuole,cytosol]
SUBAcon: [plasma membrane,vacuole,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.