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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 2
  • mitochondrion 1
  • cytosol 1
  • plasma membrane 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS2B01G400200.1 Wheat cytosol, plasma membrane, plastid, vacuole 68.34 79.02
TraesCS2D01G379300.1 Wheat cytosol, plasma membrane, plastid, vacuole 70.27 70.82
TraesCS2A01G383000.1 Wheat cytosol, plasma membrane, plastid, vacuole 68.73 68.73
EES11679 Sorghum plastid 57.92 65.5
Zm00001d001779_P001 Maize extracellular 56.37 64.04
HORVU7Hr1G078490.1 Barley cytosol, plasma membrane, plastid, vacuole 50.58 59.01
VIT_06s0080g00840.t01 Wine grape endoplasmic reticulum, plasma membrane, vacuole 40.15 51.74
GSMUA_Achr8P07780_001 Banana plasma membrane 39.77 50.0
VIT_08s0007g02880.t01 Wine grape cytosol, plasma membrane, vacuole 39.38 48.8
GSMUA_Achr3P22600_001 Banana cytosol, plasma membrane, vacuole 39.0 44.69
Solyc06g074230.2.1 Tomato cytosol, plasma membrane, plastid, vacuole 35.14 43.33
PGSC0003DMT400015067 Potato plasma membrane 34.36 42.18
KRH22659 Soybean cytosol, peroxisome, plasma membrane 30.89 36.7
KRH26660 Soybean cytosol, plasma membrane, plastid 30.89 36.7
KRG94419 Soybean cytosol, peroxisome, plasma membrane 29.34 35.19
HORVU7Hr1G038470.2 Barley endoplasmic reticulum, plasma membrane, plastid, vacuole 29.73 31.43
Protein Annotations
EnsemblPlants:HORVU2Hr1G089180.1EnsemblPlantsGene:HORVU2Hr1G089180GO:GO:0005575GO:GO:0005623GO:GO:0005886GO:GO:0016020
GO:GO:0016021InterPro:CASP/CASPLInterPro:CASP_domncoils:CoilPANTHER:PTHR11615PANTHER:PTHR11615:SF215
PFAM:PF04535SEG:segTIGRFAMs:TIGR01569TMHMM:TMhelixUniParc:UPI000B47CCD0UniProt:A0A287IVB4
MapMan:35.1:::::
Description
CASP-like protein [Source:UniProtKB/TrEMBL;Acc:A0A287IVB4]
Coordinates
chrchr2H:+:637283734..637284932
Molecular Weight (calculated)
27287.5 Da
IEP (calculated)
9.441
GRAVY (calculated)
0.619
Length
259 amino acids
Sequence
(BLAST)
001: PVPPETNQIK TSASHLINPI NPPPSLLLLT PSPNMSTSEA ATVIPVYDVA PGQGAPSKAP AAAPSAPPAA APAAAATTAP RKFPMPFFQR SDRGSRCMAF
101: LDFLLRIAAF GPALAAAIAT GTSDETLSVF TEFFQFRARF DDFPAFLFLM VASAIAAGYL LLSLPFSAVV VLRPQTTVLR LLLLVCDTIM LGLLTAAGAA
201: AAAIVDLAHS GNERANWVPI CMQFHGFCRR TSGAVVASFL SVFIFVLLVI LAAFSIRKR
Best Arabidopsis Sequence Match ( AT5G15290.1 )
(BLAST)
001: MKSGQAEIME TSKGIQKSGL MSRRIAILEF ILRIVAFFNT IGSAILMGTT HETLPFFTQF IRFQAEYNDL PALTFFVVAN AVVSGYLILS LTLAFVHIVK
101: RKTQNTRILL IILDVAMLGL LTSGASSAAA IVYLAHNGNN KTNWFAICQQ FNSFCERISG SLIGSFIAIV LLILLILLSA IALSRRH
Arabidopsis Description
CASP5Casparian strip membrane protein 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9LXF3]
SUBAcon: [plasma membrane,vacuole,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.