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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, plastid, vacuole, cytosol

Predictor Summary:
  • plastid 3
  • cytosol 1
  • vacuole 1
  • plasma membrane 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, plasma membrane, plastid, vacuole
Any Predictor:cytosol, plasma membrane, plastid, vacuole
ChloroP:plastid
iPSORT:plastid
MultiLoc:cytosol
PProwler:plastid
WoLF PSORT:vacuole
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS2B01G400200.1 Wheat cytosol, plasma membrane, plastid, vacuole 80.16 91.96
TraesCS2A01G383000.1 Wheat cytosol, plasma membrane, plastid, vacuole 83.66 83.01
Zm00001d001779_P001 Maize extracellular 63.42 71.49
HORVU2Hr1G089180.1 Barley plastid 70.82 70.27
EES11679 Sorghum plastid 57.98 65.07
TraesCS7D01G324700.1 Wheat cytosol, plasma membrane, plastid, vacuole 51.36 59.73
VIT_06s0080g00840.t01 Wine grape endoplasmic reticulum, plasma membrane, vacuole 38.91 49.75
GSMUA_Achr8P07780_001 Banana plasma membrane 38.91 48.54
VIT_08s0007g02880.t01 Wine grape cytosol, plasma membrane, vacuole 38.52 47.37
TraesCS7D01G190400.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 31.52 44.26
GSMUA_Achr3P22600_001 Banana cytosol, plasma membrane, vacuole 38.91 44.25
Solyc06g074230.2.1 Tomato cytosol, plasma membrane, plastid, vacuole 35.02 42.86
PGSC0003DMT400015067 Potato plasma membrane 34.24 41.71
KRH22659 Soybean cytosol, peroxisome, plasma membrane 30.74 36.24
KRH26660 Soybean cytosol, plasma membrane, plastid 30.74 36.24
KRG94419 Soybean cytosol, peroxisome, plasma membrane 29.57 35.19
Protein Annotations
EnsemblPlants:TraesCS2D01G379300.1EnsemblPlantsGene:TraesCS2D01G379300InterPro:CASP/CASPLInterPro:CASP_domPANTHER:PTHR11615PANTHER:PTHR11615:SF215
PFAM:PF04535SEG:segTIGRFAMs:TIGR01569TMHMM:TMhelixMapMan:35.1:
Description
No Description!
Coordinates
chr2D:+:483785205..483786206
Molecular Weight (calculated)
27410.7 Da
IEP (calculated)
10.802
GRAVY (calculated)
0.621
Length
257 amino acids
Sequence
(BLAST)
001: MSTSEAATVI PVYDVAPGQG APSNSKAPAA APPAAAPAAA TTTTPRKFPM RFFRRSDRGS RCMAFLDLLL RIAAFGPALA AAIATGTSDE TLSVFTEFFQ
101: FRARFDDFPA FLFLMVASAI AAGYLLLSLP FSAVVVLRPQ TTVLRLLLLV CDTVTTDKPF SFFPTRSNGA THIMHVTGRL TIAIMQIMLG LLTAGAAAAA
201: AIVDLAHSGN ERANWVPICM QFHGFCRRTS GAVVASFLSV FIFVLLVVLA AFSIRKR
Best Arabidopsis Sequence Match ( AT5G15290.1 )
(BLAST)
001: MKSGQAEIME TSKGIQKSGL MSRRIAILEF ILRIVAFFNT IGSAILMGTT HETLPFFTQF IRFQAEYNDL PALTFFVVAN AVVSGYLILS LTLAFVHIVK
101: RKTQNTRILL IILDVAMLGL LTSGASSAAA IVYLAHNGNN KTNWFAICQQ FNSFCERISG SLIGSFIAIV LLILLILLSA IALSRRH
Arabidopsis Description
CASP5Casparian strip membrane protein 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9LXF3]
SUBAcon: [plasma membrane,vacuole,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.