Factsheet for Os08t0101900-00

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, vacuole, cytosol

Predictor Summary:

nucleus 1
cytosol 1
golgi 1
mitochondrion 1
vacuole 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G327900.1	Wheat	plasma membrane	56.54	48.43
HORVU7Hr1G078490.1	Barley	cytosol, plasma membrane, plastid, vacuole	56.02	48.2
TraesCS7D01G324700.1	Wheat	cytosol, plasma membrane, plastid, vacuole	55.5	47.96
TraesCS7B01G228600.1	Wheat	cytosol, plasma membrane, plastid, vacuole	55.5	47.75
EES13180	Sorghum	plastid	52.36	42.55
Zm00001d052757_P001	Maize	endoplasmic reticulum, plasma membrane, vacuole	47.64	40.99
GSMUA_Achr8P07780_001	Banana	plasma membrane	40.31	37.38
VIT_06s0080g00840.t01	Wine grape	endoplasmic reticulum, plasma membrane, vacuole	39.27	37.31
GSMUA_Achr3P22600_001	Banana	cytosol, plasma membrane, vacuole	43.98	37.17
Os04t0460400-00	Rice	peroxisome, plasma membrane	34.55	35.87
Solyc06g074230.2.1	Tomato	cytosol, plasma membrane, plastid, vacuole	37.7	34.29
VIT_08s0007g02880.t01	Wine grape	cytosol, plasma membrane, vacuole	37.17	33.97
PGSC0003DMT400015067	Potato	plasma membrane	37.17	33.65
Os06t0231050-00	Rice	cytosol, plasma membrane, vacuole	31.94	33.15
Os02t0743900-00	Rice	endoplasmic reticulum, plasma membrane, vacuole	32.98	31.34
KRH22659	Soybean	cytosol, peroxisome, plasma membrane	34.55	30.28
KRH26660	Soybean	cytosol, plasma membrane, plastid	32.98	28.9
KRG94419	Soybean	cytosol, peroxisome, plasma membrane	30.37	26.85
Os02t0578366-00	Rice	plasma membrane	6.81	6.47

Protein Annotations

MapMan:35.1	UniProt:A0A0P0XAV8	ProteinID:BAT03407.1	InterPro:CASP/CASPL	InterPro:CASP_dom	GO:GO:0003674
GO:GO:0005488	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0008150	GO:GO:0009987
GO:GO:0016020	GO:GO:0016021	GO:GO:0016043	GO:GO:0051536	GO:GO:0071555	EnsemblPlantsGene:Os08g0101900
EnsemblPlants:Os08t0101900-00	PFAM:PF04535	PANTHER:PTHR11615	PANTHER:PTHR11615:SF215	TIGRFAMs:TIGR01569	TMHMM:TMhelix
UniParc:UPI000393B22A	SEG:seg	:	:	:	:

Description

UPF0497 membrane protein 2. (Os08t0101900-00)

Coordinates

chr8:+:108447..109106

Molecular Weight (calculated)

19684.5 Da

IEP (calculated)

7.142

GRAVY (calculated)

0.335

Length

191 amino acids

Sequence
(BLAST)

001: MSGSDTSGSV HVDEHGHGHG KASSSYDGAG APAPAPAPFQ GHRKAGSGSS DVPFLLRSGG SGGDGLRRCL GLIDFVLRVA AFGPTLAAAI SIGTSDERLS
101: VFTNYFQFRA RFDDFPAFEF FIVANAIAAG YMVLSLPFSA ATIMSSKATG VKLLLLICDT IMVGLLTAAA SAAAAMVYVA HEGNLRANWV P

Best Arabidopsis Sequence Match ( AT2G36100.1 )
(BLAST)

001: MAKESTTIDV GEPSTVTKSS SHVVKDAKKK GFVAVASRGG AKRGLAIFDF LLRLAAIAVT IGAASVMYTA EETLPFFTQF LQFQAGYDDL PAFQYFVIAV
101: AVVASYLVLS LPFSIVSIVR PHAVAPRLIL LICDTLVVTL NTSAAAAAAS ITYLAHNGNQ STNWLPICQQ FGDFCQNVST AVVADSIAIL FFIVLIIISA
201: IALKRH

Arabidopsis Description

CASP1Casparian strip membrane protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SIH4]
SUBAcon: [plasma membrane,vacuole,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.