Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- plasma membrane 4
- plastid 2
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- golgi 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRG99307 | Soybean | golgi | 84.09 | 70.52 |
| VIT_01s0026g00330.t01 | Wine grape | plasma membrane | 64.13 | 54.99 |
| KRH74622 | Soybean | plasma membrane | 65.8 | 54.64 |
| KRH69528 | Soybean | vacuole | 63.66 | 52.65 |
| Solyc05g005760.2.1 | Tomato | nucleus | 59.14 | 49.8 |
| PGSC0003DMT400010531 | Potato | golgi | 58.43 | 48.62 |
| AT1G70280.2 | Thale cress | plasma membrane | 55.58 | 45.97 |
| Bra003957.1-P | Field mustard | plasma membrane | 52.49 | 45.29 |
| CDX68347 | Canola | endoplasmic reticulum, plasma membrane | 52.02 | 44.88 |
| CDY23504 | Canola | plasma membrane | 52.26 | 44.53 |
| CDY11605 | Canola | endoplasmic reticulum, plasma membrane | 51.07 | 44.24 |
| Bra016227.1-P | Field mustard | plasma membrane, vacuole | 52.73 | 43.36 |
| CDY38803 | Canola | plasma membrane, vacuole | 52.26 | 43.22 |
| Os02t0730400-01 | Rice | golgi, plasma membrane, vacuole | 51.78 | 42.91 |
| TraesCS6D01G272900.2 | Wheat | plasma membrane | 51.07 | 42.83 |
| TraesCS6A01G291600.1 | Wheat | plasma membrane | 51.07 | 42.83 |
| TraesCS6B01G322100.1 | Wheat | plasma membrane | 51.07 | 42.83 |
| CDY47647 | Canola | plasma membrane | 48.93 | 42.74 |
| CDY59085 | Canola | plasma membrane | 47.98 | 42.53 |
| HORVU6Hr1G072950.14 | Barley | golgi | 52.02 | 42.52 |
| Bra024625.1-P | Field mustard | plasma membrane | 50.36 | 42.48 |
| GSMUA_Achr3P12850_001 | Banana | endoplasmic reticulum | 48.22 | 42.03 |
| Os06t0269300-01 | Rice | mitochondrion | 51.07 | 41.59 |
| EES07314 | Sorghum | golgi, plasma membrane, vacuole | 50.59 | 41.12 |
| EER89586 | Sorghum | golgi, plasma membrane | 49.41 | 41.03 |
| Zm00001d017926_P003 | Maize | golgi | 49.17 | 40.59 |
| Zm00001d051759_P001 | Maize | golgi, plasma membrane, plastid | 49.64 | 40.5 |
| Zm00001d045703_P002 | Maize | plasma membrane | 48.22 | 40.12 |
| KRG93349 | Soybean | golgi, plasma membrane, vacuole | 50.83 | 39.93 |
| AT1G23880.1 | Thale cress | plasma membrane | 51.54 | 39.82 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum, plasma membrane, plastid | 47.27 | 39.56 |
| Zm00001d037307_P001 | Maize | plasma membrane, plastid, vacuole | 47.51 | 39.37 |
| TraesCS7B01G116500.1 | Wheat | endoplasmic reticulum, plasma membrane, plastid | 48.46 | 36.23 |
| TraesCS7D01G211500.1 | Wheat | endoplasmic reticulum, plasma membrane, plastid | 47.98 | 36.14 |
| TraesCS7A01G209600.1 | Wheat | endoplasmic reticulum, plasma membrane | 47.98 | 35.44 |
| HORVU7Hr1G042740.2 | Barley | plastid | 49.17 | 30.9 |
| KRH21938 | Soybean | vacuole | 27.55 | 23.06 |
| KRH27368 | Soybean | plastid | 22.57 | 22.14 |
| KRH45709 | Soybean | endoplasmic reticulum | 18.29 | 19.25 |
Protein Annotations
| Gene3D:2.120.10.30 | MapMan:35.2 | InterPro:6-blade_b-propeller_TolB-like | EMBL:ACUP02005277 | EnsemblPlantsGene:GLYMA_08G288800 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | InterPro:IPR011042 |
| UniProt:K7L9K2 | EnsemblPlants:KRH45706 | ProteinID:KRH45706 | ProteinID:KRH45706.1 | InterPro:NHL_repeat | PFAM:PF01436 |
| PANTHER:PTHR13833 | PANTHER:PTHR13833:SF42 | SUPFAM:SSF63829 | TMHMM:TMhelix | UniParc:UPI000296167D | SEG:seg |
Description
hypothetical protein
Coordinates
chr8:+:40141307..40144806
Molecular Weight (calculated)
47451.5 Da
IEP (calculated)
7.869
GRAVY (calculated)
-0.445
Length
421 amino acids
Sequence
(BLAST)
(BLAST)
001: MEASLGSSLM LWRCCPMGSF SFLIRLIVTF IGFHPRFLCT ADPSWLQDQL KGILDMFDGK LREARMSHPK GITVDDRGNI YVADTTNMAI RKISDSGVTT
101: IAGGKWSRGG GHVDGPSEEA KFSGDFDVAY VGSSCSLLVI DRGNRAIREI QLHFDDCAYQ YGSGFPLGIA MLVGAGFFGY MLALLQRRLG TIVSSQEAQV
201: PVTVTSSVPP SPYQKPFKSV RPPLIPAECE PDKQEEGFFG SLGKLIANTG VSMVEIMGGL FPSFRRKSLS YQFQRQPLIQ QPQKQVNAWP VQESFVIPDE
301: DQPPSIDTRA PTPRKTYPFM SKDAEKMQQL RQSRAFYSGW DGDLQQQQQQ KHHHRHQYRS SIPHTYYEQS HETTNEIVFG AVQEQDRKQE SVVIKPVDYG
401: ESMYEQNIRS RMSSMGYGYR Y
101: IAGGKWSRGG GHVDGPSEEA KFSGDFDVAY VGSSCSLLVI DRGNRAIREI QLHFDDCAYQ YGSGFPLGIA MLVGAGFFGY MLALLQRRLG TIVSSQEAQV
201: PVTVTSSVPP SPYQKPFKSV RPPLIPAECE PDKQEEGFFG SLGKLIANTG VSMVEIMGGL FPSFRRKSLS YQFQRQPLIQ QPQKQVNAWP VQESFVIPDE
301: DQPPSIDTRA PTPRKTYPFM SKDAEKMQQL RQSRAFYSGW DGDLQQQQQQ KHHHRHQYRS SIPHTYYEQS HETTNEIVFG AVQEQDRKQE SVVIKPVDYG
401: ESMYEQNIRS RMSSMGYGYR Y
001: MGRDFLVLSI LILLLSGIVS SAPSANSPAK ILNGFISNHG SSLMKWLWSL KTTTKTTIAT RSMVKFENGY SVETVFDGSK LGIEPYSIEV LPNGELLILD
101: SENSNIYKIS SSLSLYSRPR LVTGSPEGYP GHVDGRLRDA KLNHPKGLTV DDRGNIYVAD TVNNAIRKIS EGGVTTIAGG KTVRNGGHVD GPSEDAKFSN
201: DFDVVYVGSS CSLLVIDRGN KAIREIQLHF DDCAYQYGSG FPLGIAVLVA AGFFGYMLAL LQRRVGSIVS SHNDQEMFEA DPDQKPMKHS RPSLIPAGDE
301: QLEKQEETFV VSLGKLVSNA WESVMEILRK KQTGTSFQQY HGTTKQSAAF STSTPWPIQE SFVIRDEDGP PPVEPRNPTP RKTYAFMSKD AEKMQQLRQS
401: RAFYSSWDAE FPNQQQQQQK QHQKHQHQQQ QQQQHRRHYS SIPHTYYEQD SEKSNEIVFG AVQEQSSKRV AKPKPKPIES GDQMNNNTQQ NLHYRSHSVS
501: YPYGYYPNT
101: SENSNIYKIS SSLSLYSRPR LVTGSPEGYP GHVDGRLRDA KLNHPKGLTV DDRGNIYVAD TVNNAIRKIS EGGVTTIAGG KTVRNGGHVD GPSEDAKFSN
201: DFDVVYVGSS CSLLVIDRGN KAIREIQLHF DDCAYQYGSG FPLGIAVLVA AGFFGYMLAL LQRRVGSIVS SHNDQEMFEA DPDQKPMKHS RPSLIPAGDE
301: QLEKQEETFV VSLGKLVSNA WESVMEILRK KQTGTSFQQY HGTTKQSAAF STSTPWPIQE SFVIRDEDGP PPVEPRNPTP RKTYAFMSKD AEKMQQLRQS
401: RAFYSSWDAE FPNQQQQQQK QHQKHQHQQQ QQQQHRRHYS SIPHTYYEQD SEKSNEIVFG AVQEQSSKRV AKPKPKPIES GDQMNNNTQQ NLHYRSHSVS
501: YPYGYYPNT
Arabidopsis Description
NHL domain-containing protein [Source:UniProtKB/TrEMBL;Acc:F4I5D7]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.