Factsheet for TraesCS7B01G116500.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, endoplasmic reticulum, plastid

Predictor Summary:

plastid 2
extracellular 3
golgi 3
plasma membrane 4
endoplasmic reticulum 4
vacuole 3
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, plasma membrane, plastid
Any Predictor:	nucleus, plastid, secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	plastid
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G211500.1	Wheat	endoplasmic reticulum, plasma membrane, plastid	97.34	98.03
TraesCS7A01G209600.1	Wheat	endoplasmic reticulum, plasma membrane	96.27	95.09
HORVU7Hr1G042740.2	Barley	plastid	95.91	80.6
Os06t0269300-01	Rice	mitochondrion	72.65	79.11
EER89586	Sorghum	golgi, plasma membrane	67.14	74.56
Zm00001d045703_P002	Maize	plasma membrane	65.19	72.53
TraesCS6B01G322100.1	Wheat	plasma membrane	62.34	69.92
Zm00001d037307_P001	Maize	plasma membrane, plastid, vacuole	62.88	69.69
GSMUA_Achr10P...	Banana	endoplasmic reticulum, plasma membrane, plastid	50.98	57.06
VIT_01s0026g00330.t01	Wine grape	plasma membrane	47.78	54.79
KRG99307	Soybean	golgi	46.36	51.99
VIT_14s0066g01590.t01	Wine grape	golgi	46.0	51.59
Solyc05g005760.2.1	Tomato	nucleus	44.58	50.2
KRH74622	Soybean	plasma membrane	45.12	50.1
PGSC0003DMT400010531	Potato	golgi	44.58	49.6
PGSC0003DMT400001332	Potato	golgi	43.87	49.11
KRH45706	Soybean	plasma membrane	36.23	48.46
CDY11605	Canola	endoplasmic reticulum, plasma membrane	41.74	48.35
AT1G70280.2	Thale cress	plasma membrane	43.69	48.33
KRH69528	Soybean	vacuole	43.69	48.33
CDX68347	Canola	endoplasmic reticulum, plasma membrane	41.39	47.75
Solyc02g087010.2.1	Tomato	golgi	42.98	47.73
Bra016227.1-P	Field mustard	plasma membrane, vacuole	43.34	47.66
Bra003957.1-P	Field mustard	plasma membrane	41.21	47.54
CDY38803	Canola	plasma membrane, vacuole	42.81	47.35
CDY23504	Canola	plasma membrane	41.03	46.76
KRG93349	Soybean	golgi, plasma membrane, vacuole	44.41	46.64
CDY59085	Canola	plasma membrane	38.54	45.68
CDY47647	Canola	plasma membrane	38.72	45.23
Solyc10g018280.1.1	Tomato	cytosol	5.68	45.07
Bra024625.1-P	Field mustard	plasma membrane	39.61	44.69
CDX69553	Canola	plasma membrane	35.88	43.63
CDY09894	Canola	golgi, plasma membrane	35.7	43.41
Bra008732.1-P	Field mustard	plasma membrane	35.52	43.2
Solyc10g018290.1.1	Tomato	extracellular	6.57	43.02
AT5G14890.1	Thale cress	plasma membrane	36.41	42.53
AT1G23880.1	Thale cress	plasma membrane	40.14	41.47
Solyc06g048720.1.1	Tomato	endoplasmic reticulum, extracellular	7.82	38.6
TraesCS6B01G235400.1	Wheat	endoplasmic reticulum	25.22	28.8
TraesCS2B01G153900.1	Wheat	extracellular, plasma membrane, vacuole	18.29	25.62

Protein Annotations

EnsemblPlants:TraesCS7B01G116500.1	EnsemblPlantsGene:TraesCS7B01G116500	Gene3D:2.120.10.30	InterPro:6-blade_b-propeller_TolB-like	InterPro:IPR011042	ncoils:Coil
PANTHER:PTHR13833	PANTHER:PTHR13833:SF59	SEG:seg	SignalP:SignalP-noTM	SUPFAM:SSF101898	TMHMM:TMhelix
MapMan:35.2	:	:	:	:	:

Description

No Description!

Coordinates

chr7B:-:135040843..135045344

Molecular Weight (calculated)

62773.9 Da

IEP (calculated)

8.595

GRAVY (calculated)

-0.697

Length

563 amino acids

Sequence
(BLAST)

001: MEARAPSAAS ARAVAALLVA ALLLGAPVSA SAASSYPAKV LGGLLTSTAT AVAKKLWSLK STARTATAAA SGRSMVKYEG GYAVETVFDG SNLGIEPHSV
101: ELTPAGDLLL LDSMNSNLYR VQLPLSRYSR PKLVAGSLEG LSGHVDGRLR EAKLNHPKGF TVDDRGNIYV ADAMNMAIRK ISDTGVTTIA GGKSMRGGHM
201: DGPSDDAKFS TDFEIRYISS SCSLLVIDRG NQAIREIPLQ PDDCEYQDEA GFPLGVALLF AAGFFGYMLA LLQRRVLGMV SATEEPQTPP RPSNASIPPY
301: QPYQPYQQPF KPSFRPPLIP NEDEAGKHEA EEGFFTSMGK LMGGAKSSVA DMFSRKKRPA RQHHQQHQQR RANPWPVQES YAIPHEETPP PLDSRGPTPQ
401: KNYAFVTTEP EKAHHVRHGQ PYLGGWDARG PQPPPEQQQV YPHHQQQQLQ QHRQQLEQQV YRQQHRQPPE QQAYQLQQQH QQRRQPEQQM YQLQQHRQYS
501: SGPQTFYEQS CETTNEVVFG AVQEVDSKRR MVEIKAVNYG DTFYEQYGMR YRNNYIGYNS NNY

Best Arabidopsis Sequence Match ( AT1G23880.1 )
(BLAST)

001: MTNVSLFYAS LSILFCCFLF FFNLSPSFFF LRLSRSVTTS FNILNIHLSH FAIRLSSTLV MSRHFLFLGI IILLFSAFVA SAPSSTSPAK IVNSFISNHG
101: TSLLKWLWSL SFKTTTKTAV PTKSMVKFEN GYSVETVLDG SKLGIEPYSI QVLSNGELLI LDSQNSNIYQ ISSSLSLYSR PRLVTGSPEG YPGHVDGRLR
201: DARLNNPKGL TVDDRGNIYV ADTVNNAIRK ISEAGVTTIA GGKMVRGGGH VDGPSEDAKF SNDFDVVYLG SSCSLLVIDR GNQAIREIQL HFDDCADQYG
301: SGFPLGIAVL VAAVFFGYML ALLQRRLSSI VSYHTDQEVF EAVPDQDPIK PVRPPLILTG DEQEKQEESF LGTLQIFISN AWVFSVELFS GMFPGLRKKQ
401: TVGLNFNHQE TKHSAFSTTS WPIQESFVIH NKDEPPPVES RNATPGKIYP FMSKDATEKM QQLRQSRALY RSLDAEFLQE QQQEKHQQYH HRHHSTIPYT
501: LYEQSSEKTN EIVFGPGQEQ DQMNTHQNIH HRAHQFVSYP YGYYS

Arabidopsis Description

At1g23880/T23E23_8 [Source:UniProtKB/TrEMBL;Acc:Q8S9K1]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.