Factsheet for Solyc10g018280.1.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
mitochondrion 4
cytosol 3
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	secretory
iPSORT:	mitochondrion
MultiLoc:	cytosol
Plant-mPloc:	plastid
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc10g018290.1.1	Tomato	extracellular	91.55	75.58
Solyc06g048720.1.1	Tomato	endoplasmic reticulum, extracellular	91.55	57.02
Solyc05g005760.2.1	Tomato	nucleus	69.01	9.8
GSMUA_Achr10P...	Banana	endoplasmic reticulum, plasma membrane, plastid	54.93	7.75
Solyc02g087010.2.1	Tomato	golgi	53.52	7.5
GSMUA_Achr3P12850_001	Banana	endoplasmic reticulum	46.48	6.83
Zm00001d051759_P001	Maize	golgi, plasma membrane, plastid	47.89	6.59
TraesCS6A01G291600.1	Wheat	plasma membrane	46.48	6.57
EES07314	Sorghum	golgi, plasma membrane, vacuole	47.89	6.56
Os02t0730400-01	Rice	golgi, plasma membrane, vacuole	46.48	6.5
Zm00001d017926_P003	Maize	golgi	46.48	6.47
TraesCS6B01G322100.1	Wheat	plasma membrane	45.07	6.37
TraesCS6D01G272900.2	Wheat	plasma membrane	45.07	6.37
HORVU6Hr1G072950.14	Barley	golgi	45.07	6.21
Os06t0269300-01	Rice	mitochondrion	45.07	6.19
Zm00001d037307_P001	Maize	plasma membrane, plastid, vacuole	43.66	6.1
TraesCS7D01G211500.1	Wheat	endoplasmic reticulum, plasma membrane, plastid	45.07	5.72
EER89586	Sorghum	golgi, plasma membrane	40.85	5.72
TraesCS7B01G116500.1	Wheat	endoplasmic reticulum, plasma membrane, plastid	45.07	5.68
TraesCS7A01G209600.1	Wheat	endoplasmic reticulum, plasma membrane	45.07	5.61
Zm00001d045703_P002	Maize	plasma membrane	38.03	5.34
Solyc05g005770.2.1	Tomato	nucleus	29.58	5.28
HORVU7Hr1G042740.2	Barley	plastid	45.07	4.78
Solyc07g062300.2.1	Tomato	plasma membrane	28.17	4.18

Protein Annotations

EnsemblPlants:Solyc10g018280.1.1	EnsemblPlantsGene:Solyc10g018280.1	PANTHER:PTHR13833	PANTHER:PTHR13833:SF57	UniParc:UPI000276C77F	UniProt:K4CYV2
MapMan:35.2	:	:	:	:	:

Description

No Description!

Coordinates

chr10:+:7342932..7343147

Molecular Weight (calculated)

8236.9 Da

IEP (calculated)

4.420

GRAVY (calculated)

-0.328

Length

71 amino acids

Sequence
(BLAST)

1: MKWVWSLKAN TKTVISVRPM MKFENGYSVE TVFDGSKLGI EPYSVEIMSG WWLDQPMDTL DMLTENCGRQ E

Best Arabidopsis Sequence Match ( AT1G70280.1 )
(BLAST)

001: MVKFENGYSV ETVFDGSKLG IEPYSIEVLP NGELLILDSE NSNIYKISSS LSLYSRPRLV TGSPEGYPGH VDGRLRDAKL NHPKGLTVDD RGNIYVADTV
101: NNAIRKISEG GVTTIAGGKT VRNGGHVDGP SEDAKFSNDF DVVYVGSSCS LLVIDRGNKA IREIQLHFDD CAYQYGSGFP LGIAVLVAAG FFGYMLALLQ
201: RRVGSIVSSH NDQEMFEADP DQKPMKHSRP SLIPAGDEQL EKQEETFVVS LGKLVSNAWE SVMEILRKKQ TGTSFQQYHG TTKQSAAFST STPWPIQESF
301: VIRDEDGPPP VEPRNPTPRK TYAFMSKDAE KMQQLRQSRA FYSSWDAEFP NQQQQQQKQH QKHQHQQQQQ QQHRRHYSSI PHTYYEQDSE KSNEIVFGAV
401: QEQSSKRVAK PKPKPIESGD QMNNNTQQNL HYRSHSVSYP YGYYPNT

Arabidopsis Description

NHL domain-containing protein [Source:UniProtKB/TrEMBL;Acc:F4I5D7]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.