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Maize
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Maize
Subcellular Localization
min:
: max

 
Winner_takes_all: golgi

Predictor Summary:
  • plastid 1
  • extracellular 4
  • endoplasmic reticulum 4
  • vacuole 4
  • plasma membrane 5
  • golgi 6
Predictors GFP MS/MS Papers
Winner Takes All:golgi
Any Predictor:plastid, secretory
ChloroP:plastid
iPSORT:secretory
MultiLoc:golgi
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
EES07314 Sorghum golgi, plasma membrane, vacuole 96.08 94.59
Zm00001d051759_P001 Maize golgi, plasma membrane, plastid 91.37 90.31
Os02t0730400-01 Rice golgi, plasma membrane, vacuole 80.0 80.31
TraesCS6A01G291600.1 Wheat plasma membrane 78.63 79.88
TraesCS6D01G272900.2 Wheat plasma membrane 78.04 79.28
TraesCS6B01G322100.1 Wheat plasma membrane 77.84 79.08
HORVU6Hr1G072950.14 Barley golgi 78.04 77.28
Zm00001d045703_P002 Maize plasma membrane 61.18 61.66
Zm00001d037307_P001 Maize plasma membrane, plastid, vacuole 60.39 60.63
GSMUA_Achr10P... Banana endoplasmic reticulum, plasma membrane, plastid 58.43 59.24
VIT_01s0026g00330.t01 Wine grape plasma membrane 55.69 57.84
KRG99307 Soybean golgi 53.92 54.78
KRH74622 Soybean plasma membrane 54.31 54.64
VIT_14s0066g01590.t01 Wine grape golgi 51.76 52.59
CDY11605 Canola endoplasmic reticulum, plasma membrane 50.0 52.47
KRH69528 Soybean vacuole 51.96 52.06
PGSC0003DMT400001332 Potato golgi 50.78 51.49
AT1G70280.2 Thale cress plasma membrane 51.18 51.28
Bra003957.1-P Field mustard plasma membrane 48.82 51.02
CDX68347 Canola endoplasmic reticulum, plasma membrane 48.82 51.02
Solyc05g005760.2.1 Tomato nucleus 50.0 51.0
Bra016227.1-P Field mustard plasma membrane, vacuole 51.18 50.98
CDY38803 Canola plasma membrane, vacuole 50.78 50.88
Solyc02g087010.2.1 Tomato golgi 50.39 50.69
CDY23504 Canola plasma membrane 48.63 50.2
PGSC0003DMT400010531 Potato golgi 49.61 50.0
CDY47647 Canola plasma membrane 46.86 49.59
CDY59085 Canola plasma membrane 46.08 49.47
KRH45706 Soybean plasma membrane 40.59 49.17
Bra024625.1-P Field mustard plasma membrane 47.45 48.5
KRG93349 Soybean golgi, plasma membrane, vacuole 49.8 47.39
Solyc10g018290.1.1 Tomato extracellular 7.84 46.51
Solyc10g018280.1.1 Tomato cytosol 6.47 46.48
AT1G23880.1 Thale cress plasma membrane 47.65 44.59
CDY09894 Canola golgi, plasma membrane 40.2 44.28
CDX69553 Canola plasma membrane 40.0 44.06
Bra008732.1-P Field mustard plasma membrane 40.0 44.06
AT5G14890.1 Thale cress plasma membrane 40.2 42.53
Solyc06g048720.1.1 Tomato endoplasmic reticulum, extracellular 8.43 37.72
Zm00001d016228_P001 Maize plasma membrane 28.63 28.35
Zm00001d032308_P001 Maize endoplasmic reticulum, extracellular, golgi 18.82 22.97
Protein Annotations
EMBL:BT062390EnsemblPlants:Zm00001d017926_P003EnsemblPlants:Zm00001d017926_T003EnsemblPlantsGene:Zm00001d017926EntrezGene:100381837Gene3D:2.120.10.30
GO:GO:0005575GO:GO:0016020GO:GO:0016021InterPro:6-blade_b-propeller_TolB-likeInterPro:IPR011042PANTHER:PTHR13833
PANTHER:PTHR13833:SF59ProteinID:AQK74530.1ProteinID:AQK74537.1SEG:segSignalP:SignalP-noTMSUPFAM:SSF101898
TMHMM:TMhelixUniParc:UPI0001948A48UniProt:C0HJ84MapMan:35.2::
Description
NHL domain-containing protein
Coordinates
chr5:+:210202931..210207413
Molecular Weight (calculated)
55820.3 Da
IEP (calculated)
9.158
GRAVY (calculated)
-0.445
Length
510 amino acids
Sequence
(BLAST)
001: MATKGGNARG VPVGVLLVAA LLLCSLAPAS ASSYPARVVS GFLSNAASAV VKRLWSLKST TKIASGGKSM VKYEGGYTVE TVFDGSKLGI EPYSVEVTQG
101: GELLVMDSMN SNIYRMALPL SRYSRPKLVA GSPEGFPGHV DGKLREARMN HPKGFTVDDR GNIYVADAMN MAIRKISDTG VTTIAGGKSG RGGHVDGPSD
201: EAKFSTDFEV RYIGSSCSLL VIDRGNQAIR EIQLHFDDCV YQYEAGFPLG VALLLAAAFF GYMLALLQRR VLGMYSNGDE QDHESPVKAK LTSIPPPYQK
301: PLKPYVHPLL IPNDDEPVKQ EEEEGLFTSI GKLVGGAKSS IAEIIGAAFS RKKRVNVHHH QLGRPTSWPA QESYAIPRDE TPPPLDTRAP TPRKNYAFMS
401: KEPEKIHHIR HGRPQLHGWT GEAAPQQQQP QQVRHQQYVQ HHRQYSAGPQ TYYEPSCDAT KEIVFGAVQE GDTSRRPVEI KAVNHGDAAP YEQNGLRFRS
501: SYSVRYNGNN
Best Arabidopsis Sequence Match ( AT1G23880.1 )
(BLAST)
001: MTNVSLFYAS LSILFCCFLF FFNLSPSFFF LRLSRSVTTS FNILNIHLSH FAIRLSSTLV MSRHFLFLGI IILLFSAFVA SAPSSTSPAK IVNSFISNHG
101: TSLLKWLWSL SFKTTTKTAV PTKSMVKFEN GYSVETVLDG SKLGIEPYSI QVLSNGELLI LDSQNSNIYQ ISSSLSLYSR PRLVTGSPEG YPGHVDGRLR
201: DARLNNPKGL TVDDRGNIYV ADTVNNAIRK ISEAGVTTIA GGKMVRGGGH VDGPSEDAKF SNDFDVVYLG SSCSLLVIDR GNQAIREIQL HFDDCADQYG
301: SGFPLGIAVL VAAVFFGYML ALLQRRLSSI VSYHTDQEVF EAVPDQDPIK PVRPPLILTG DEQEKQEESF LGTLQIFISN AWVFSVELFS GMFPGLRKKQ
401: TVGLNFNHQE TKHSAFSTTS WPIQESFVIH NKDEPPPVES RNATPGKIYP FMSKDATEKM QQLRQSRALY RSLDAEFLQE QQQEKHQQYH HRHHSTIPYT
501: LYEQSSEKTN EIVFGPGQEQ DQMNTHQNIH HRAHQFVSYP YGYYS
Arabidopsis Description
At1g23880/T23E23_8 [Source:UniProtKB/TrEMBL;Acc:Q8S9K1]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.