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Maize
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Maize
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 1
  • extracellular 4
  • endoplasmic reticulum 4
  • vacuole 4
  • plasma membrane 6
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:plastid, secretory
ChloroP:plastid
iPSORT:secretory
MultiLoc:golgi
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
EER89586 Sorghum golgi, plasma membrane 90.91 90.73
Zm00001d037307_P001 Maize plasma membrane, plastid, vacuole 79.84 79.53
Os06t0269300-01 Rice mitochondrion 73.52 71.95
TraesCS7B01G116500.1 Wheat endoplasmic reticulum, plasma membrane, plastid 72.53 65.19
TraesCS7D01G211500.1 Wheat endoplasmic reticulum, plasma membrane, plastid 71.94 65.12
TraesCS7A01G209600.1 Wheat endoplasmic reticulum, plasma membrane 72.13 64.04
Zm00001d017926_P003 Maize golgi 61.66 61.18
Zm00001d051759_P001 Maize golgi, plasma membrane, plastid 60.87 59.69
HORVU7Hr1G042740.2 Barley plastid 71.94 54.33
GSMUA_Achr10P... Banana endoplasmic reticulum, plasma membrane, plastid 53.95 54.27
VIT_01s0026g00330.t01 Wine grape plasma membrane 51.19 52.75
KRG99307 Soybean golgi 50.2 50.6
VIT_14s0066g01590.t01 Wine grape golgi 48.42 48.8
KRH74622 Soybean plasma membrane 48.81 48.72
KRH45706 Soybean plasma membrane 40.12 48.22
KRH69528 Soybean vacuole 48.22 47.94
PGSC0003DMT400001332 Potato golgi 46.05 46.32
Solyc05g005760.2.1 Tomato nucleus 45.65 46.2
AT1G70280.2 Thale cress plasma membrane 46.25 45.97
Solyc02g087010.2.1 Tomato golgi 45.45 45.36
Bra003957.1-P Field mustard plasma membrane 43.68 45.29
CDX68347 Canola endoplasmic reticulum, plasma membrane 43.68 45.29
Bra016227.1-P Field mustard plasma membrane, vacuole 45.65 45.12
CDY11605 Canola endoplasmic reticulum, plasma membrane 43.28 45.06
PGSC0003DMT400010531 Potato golgi 45.06 45.06
CDY38803 Canola plasma membrane, vacuole 45.26 44.99
CDY23504 Canola plasma membrane 43.68 44.74
CDY59085 Canola plasma membrane 41.9 44.63
KRG93349 Soybean golgi, plasma membrane, vacuole 46.64 44.03
CDY47647 Canola plasma membrane 41.9 43.98
Bra024625.1-P Field mustard plasma membrane 42.69 43.29
AT5G14890.1 Thale cress plasma membrane 40.71 42.74
CDX69553 Canola plasma membrane 38.74 42.33
CDY09894 Canola golgi, plasma membrane 38.74 42.33
Bra008732.1-P Field mustard plasma membrane 37.94 41.47
AT1G23880.1 Thale cress plasma membrane 42.69 39.63
Solyc10g018280.1.1 Tomato cytosol 5.34 38.03
Solyc10g018290.1.1 Tomato extracellular 5.93 34.88
Solyc06g048720.1.1 Tomato endoplasmic reticulum, extracellular 6.92 30.7
Zm00001d016228_P001 Maize plasma membrane 27.67 27.18
Zm00001d032308_P001 Maize endoplasmic reticulum, extracellular, golgi 19.57 23.68
Protein Annotations
EnsemblPlants:Zm00001d045703_P002EnsemblPlants:Zm00001d045703_T002EnsemblPlantsGene:Zm00001d045703Gene3D:2.120.10.30GO:GO:0005575GO:GO:0016020
GO:GO:0016021InterPro:6-blade_b-propeller_TolB-likeInterPro:IPR011042PANTHER:PTHR13833PANTHER:PTHR13833:SF59ProteinID:AQL03011.1
SEG:segSignalP:SignalP-TMSUPFAM:SSF101898TMHMM:TMhelixUniParc:UPI0001CABC32UniProt:K7VC79
MapMan:35.2:::::
Description
NHL domain-containing protein
Coordinates
chr9:-:33995308..34000710
Molecular Weight (calculated)
55945.1 Da
IEP (calculated)
8.749
GRAVY (calculated)
-0.443
Length
506 amino acids
Sequence
(BLAST)
001: MVAMAAPGRV ALLAAALLFG AFFPSAFATS SYPARLAGRL LSTTASAVAK QLWSLKSAAT KTATASVAGR SMVRYEGGYA VDTVFDGSKL GIEPHAAQIN
101: RAGDLLLLDS INSNIYRVQL PLSPYSRPKL LAGSPEGLSG HVDGRLREAR MNHPKGFTVD DRGNIYVADA MNMAIRKISD TGVTTIAGGK SIRGGYIDEP
201: SVSDDAKFST DFEVQYISST CSLLVIDRGN QAIREIPLND DDCAYQYEAG FPLGFALLCA AGFFGYMLAL LQHRLLGMPS TINKPQAPPR PSIASIPPYQ
301: KPLNPYVRQP FIPREETARQ EPEEGFFTSA GKLVGGAKSS VAEVFGFKKK SLSNPYHQQQ RRANPWPVQE SYAIPHDEPP PALDTRAPAP QKNYSSEKIH
401: YVRHGHPYFN SWDGHRLPQQ QPDQQLYHQQ QQQHLQQHRQ CSAGPQTFYE QSCEATNEVV FGAVQEVDSK RRMVEIKAVN YGDTFYEQYG MRYRNNFIGY
501: NNTNNY
Best Arabidopsis Sequence Match ( AT5G14890.1 )
(BLAST)
001: MRKNANLLIL FMIFMFFFCG LSSVSAKPPP VKIVSGLVTN VASILWKWLW SLQTSTTTTT TTKSGVSSRS MVKYESGYNM ETVFDGSKLG IEPYAIEVSP
101: NGGELIVLDS ENSNIHKISM PLSRYGKPKL LSGSQEGYTG HVDGKLKEAR MNRPRGLAMD DRGNIYVADT INMAIRKISD DGVSTIAAGG RWSGGSKEES
201: MRFSDDFDLI YVSSSCSLLV IDRGNQLIKE IQLHDHDCSQ PEPDTDSLHL GTALLVAAVF FGYMLALLVR RVRSLFSSSS HDTKSKRHVA TPSMTMAPYQ
301: RYPRPVRQPL IPPQHESEKE EGFLGSLGKL VVKTGSSVSE MMSGSRNVIP PNFHQYHHQQ EPNQWPVQES FAIPEEDGPP ALEPRSGTNP DKPYLRAQGT
401: NQNRSYYQDY DQYQNQQKRN VNDTASFEDN REKNEIVFGA VQEQDGRREA MVIKAVDFNE AINDQRNLRP RINYMGYSSQ VY
Arabidopsis Description
NHL domain-containing protein [Source:TAIR;Acc:AT5G14890]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.