Factsheet for TraesCS7A01G209600.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, plasma membrane

Predictor Summary:

plastid 1
extracellular 4
endoplasmic reticulum 5
vacuole 4
plasma membrane 5
golgi 4
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, plasma membrane
Any Predictor:	nucleus, plastid, secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G116500.1	Wheat	endoplasmic reticulum, plasma membrane, plastid	95.09	96.27
TraesCS7D01G211500.1	Wheat	endoplasmic reticulum, plasma membrane, plastid	94.39	96.24
HORVU7Hr1G042740.2	Barley	plastid	94.39	80.3
Os06t0269300-01	Rice	mitochondrion	70.88	78.14
EER89586	Sorghum	golgi, plasma membrane	65.96	74.16
Zm00001d045703_P002	Maize	plasma membrane	64.04	72.13
TraesCS6A01G291600.1	Wheat	plasma membrane	61.4	69.72
Zm00001d037307_P001	Maize	plasma membrane, plastid, vacuole	61.75	69.29
GSMUA_Achr10P...	Banana	endoplasmic reticulum, plasma membrane, plastid	49.3	55.86
VIT_01s0026g00330.t01	Wine grape	plasma membrane	47.19	54.79
KRG99307	Soybean	golgi	45.61	51.79
VIT_14s0066g01590.t01	Wine grape	golgi	45.26	51.39
Solyc05g005760.2.1	Tomato	nucleus	43.68	49.8
KRH74622	Soybean	plasma membrane	44.04	49.51
PGSC0003DMT400010531	Potato	golgi	43.86	49.41
PGSC0003DMT400001332	Potato	golgi	43.51	49.3
CDY11605	Canola	endoplasmic reticulum, plasma membrane	41.05	48.15
KRH45706	Soybean	plasma membrane	35.44	47.98
AT1G70280.2	Thale cress	plasma membrane	42.81	47.94
Solyc02g087010.2.1	Tomato	golgi	42.63	47.93
KRH69528	Soybean	vacuole	42.63	47.74
CDX68347	Canola	endoplasmic reticulum, plasma membrane	40.53	47.34
Bra016227.1-P	Field mustard	plasma membrane, vacuole	42.46	47.27
Bra003957.1-P	Field mustard	plasma membrane	40.35	47.13
CDY38803	Canola	plasma membrane, vacuole	41.93	46.95
CDY23504	Canola	plasma membrane	40.35	46.56
KRG93349	Soybean	golgi, plasma membrane, vacuole	42.98	45.71
CDY59085	Canola	plasma membrane	37.89	45.47
Solyc10g018280.1.1	Tomato	cytosol	5.61	45.07
CDY47647	Canola	plasma membrane	38.07	45.02
Bra024625.1-P	Field mustard	plasma membrane	39.12	44.69
CDX69553	Canola	plasma membrane	35.44	43.63
CDY09894	Canola	golgi, plasma membrane	35.26	43.41
Solyc10g018290.1.1	Tomato	extracellular	6.49	43.02
Bra008732.1-P	Field mustard	plasma membrane	34.91	42.98
AT5G14890.1	Thale cress	plasma membrane	35.96	42.53
AT1G23880.1	Thale cress	plasma membrane	39.65	41.47
Solyc06g048720.1.1	Tomato	endoplasmic reticulum, extracellular	7.72	38.6
TraesCS6A01G194600.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	24.39	28.19
TraesCS2A01G131500.2	Wheat	extracellular, golgi, plasma membrane	17.54	23.75

Protein Annotations

EnsemblPlants:TraesCS7A01G209600.1	EnsemblPlantsGene:TraesCS7A01G209600	Gene3D:2.120.10.30	InterPro:6-blade_b-propeller_TolB-like	InterPro:IPR011042	ncoils:Coil
PANTHER:PTHR13833	PANTHER:PTHR13833:SF59	SEG:seg	SignalP:SignalP-noTM	SUPFAM:SSF101898	TMHMM:TMhelix
MapMan:35.2	:	:	:	:	:

Description

No Description!

Coordinates

chr7A:-:172239597..172243425

Molecular Weight (calculated)

63267.3 Da

IEP (calculated)

8.389

GRAVY (calculated)

-0.675

Length

570 amino acids

Sequence
(BLAST)

001: MDASAASAAG ARGVAALLVA ALLLGAPVSA SAASSYPAKV LGGLLTSTAT AVAKKLWSLK STARTATAAA AAASGRSMVK YEGGYAVETV FDGSNLGIEP
101: HSVELTPAGD LLLLDSMNSN LYRVQLPLSR YSRPKLVAGS LEGLSGHVDG RLREAKLNHP KGFTVDDRGN IYVADAMNMA IRKISDTGVT TIAGGKSMRG
201: GHMDGPSDDA KFSTDFEIRY ISSSCSLLVI DRGNQAIREI PLQPDDCEYQ DEAGFPLGTI SPQSVALLFA AGFFGYMLAL LQRRVLGMVS ATEEPQMPPR
301: PSNASIPPYQ PYQPYQQPFK PSFRPPLIPN EDEAGKHEAE EGFFTSVGKL MGGAKSSVAD MFSRKKRPAR QHHQHHQQPR GSHWPVQESY AIPHEETPPP
401: LDSRGPTPQK NYGFVTTEPE KAHHVRHGQP YLGGWDARGP HHQQQVYPHH QQQQQHRQQL EQQVYRQQQQ HRQPPEQQAY HLQQHQHQQR RQPEQQMYQL
501: QQHRQYSSGP QTFYEQSCET TNEVVFGAVQ EVDSKRRMVE IKAVNYGDTF YEQYGMRYRN NYIGYNSNNY

Best Arabidopsis Sequence Match ( AT1G23880.1 )
(BLAST)

001: MTNVSLFYAS LSILFCCFLF FFNLSPSFFF LRLSRSVTTS FNILNIHLSH FAIRLSSTLV MSRHFLFLGI IILLFSAFVA SAPSSTSPAK IVNSFISNHG
101: TSLLKWLWSL SFKTTTKTAV PTKSMVKFEN GYSVETVLDG SKLGIEPYSI QVLSNGELLI LDSQNSNIYQ ISSSLSLYSR PRLVTGSPEG YPGHVDGRLR
201: DARLNNPKGL TVDDRGNIYV ADTVNNAIRK ISEAGVTTIA GGKMVRGGGH VDGPSEDAKF SNDFDVVYLG SSCSLLVIDR GNQAIREIQL HFDDCADQYG
301: SGFPLGIAVL VAAVFFGYML ALLQRRLSSI VSYHTDQEVF EAVPDQDPIK PVRPPLILTG DEQEKQEESF LGTLQIFISN AWVFSVELFS GMFPGLRKKQ
401: TVGLNFNHQE TKHSAFSTTS WPIQESFVIH NKDEPPPVES RNATPGKIYP FMSKDATEKM QQLRQSRALY RSLDAEFLQE QQQEKHQQYH HRHHSTIPYT
501: LYEQSSEKTN EIVFGPGQEQ DQMNTHQNIH HRAHQFVSYP YGYYS

Arabidopsis Description

At1g23880/T23E23_8 [Source:UniProtKB/TrEMBL;Acc:Q8S9K1]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.