Factsheet for Bra008732.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 5
plasma membrane 7
golgi 5
plastid 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	plasma membrane
Plant-mPloc:	plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX69553	Canola	plasma membrane	86.18	86.18
AT5G14890.1	Thale cress	plasma membrane	77.54	74.48
VIT_14s0066g01590.t01	Wine grape	golgi	52.05	48.01
PGSC0003DMT400001332	Potato	golgi	49.03	45.13
Solyc02g087010.2.1	Tomato	golgi	48.81	44.58
KRG93349	Soybean	golgi, plasma membrane, vacuole	48.16	41.6
Os02t0730400-01	Rice	golgi, plasma membrane, vacuole	45.57	41.54
TraesCS6B01G322100.1	Wheat	plasma membrane	44.92	41.43
TraesCS6A01G291600.1	Wheat	plasma membrane	44.92	41.43
TraesCS6D01G272900.2	Wheat	plasma membrane	44.71	41.24
Bra003957.1-P	Field mustard	plasma membrane	43.2	40.98
EES07314	Sorghum	golgi, plasma membrane, vacuole	45.36	40.54
Os06t0269300-01	Rice	mitochondrion	45.14	40.43
Bra016227.1-P	Field mustard	plasma membrane, vacuole	44.49	40.23
HORVU6Hr1G072950.14	Barley	golgi	44.71	40.19
Zm00001d017926_P003	Maize	golgi	44.06	40.0
Zm00001d051759_P001	Maize	golgi, plasma membrane, plastid	44.49	39.92
GSMUA_Achr3P12850_001	Banana	endoplasmic reticulum	41.47	39.75
Bra024625.1-P	Field mustard	plasma membrane	42.12	39.08
EER89586	Sorghum	golgi, plasma membrane	42.76	39.05
Zm00001d045703_P002	Maize	plasma membrane	41.47	37.94
Zm00001d037307_P001	Maize	plasma membrane, plastid, vacuole	41.04	37.4
GSMUA_Achr10P...	Banana	endoplasmic reticulum, plasma membrane, plastid	39.74	36.58
TraesCS7B01G116500.1	Wheat	endoplasmic reticulum, plasma membrane, plastid	43.2	35.52
TraesCS7D01G211500.1	Wheat	endoplasmic reticulum, plasma membrane, plastid	42.76	35.42
TraesCS7A01G209600.1	Wheat	endoplasmic reticulum, plasma membrane	42.98	34.91
HORVU7Hr1G042740.2	Barley	plastid	43.2	29.85
Bra001570.1-P	Field mustard	plastid	28.29	26.57
Bra024626.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	19.65	24.4

Protein Annotations

EnsemblPlants:Bra008732.1	EnsemblPlants:Bra008732.1-P	EnsemblPlantsGene:Bra008732	Gene3D:2.120.10.30	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:6-blade_b-propeller_TolB-like	InterPro:IPR011042	InterPro:NHL_repeat	PANTHER:PTHR13833	PANTHER:PTHR13833:SF57
PFAM:PF01436	SEG:seg	SignalP:SignalP-noTM	SUPFAM:SSF101898	TMHMM:TMhelix	UniParc:UPI0002545199
UniProt:M4CWY5	MapMan:35.2	:	:	:	:

Description

AT5G14890 (E=3e-194) | NHL repeat-containing protein

Coordinates

chrA10:-:13617162..13619497

Molecular Weight (calculated)

52021.7 Da

IEP (calculated)

7.690

GRAVY (calculated)

-0.515

Length

463 amino acids

Sequence
(BLAST)

001: MMKNGNWVVL SLIFLFLLCG LSSVSAKPPP VKIVSGLVTN VASMLWKWLW SLQTSTTTTA TTKSGVSSRS MVKYESGYNI ETVFDGNKLE IEPYAVEVSP
101: SGEELIVLDS ENSNIHKISM PLSRYGKPKL VSGSQEGYTG HVDGKLKEAK MNRPRGLAID DSGNIYVADT NNMAIRKISD AGVSTIATGG RFSDDFDLIY
201: VSSTCSLLVI DRGNQVIREI QLHDHDCSHH EPETDLHLGT ALLVAAAFFG YMFALLVRRV RSLFSSFRHN NKRHVAKPNM TMAPYQRYPR PVRQPLIPPQ
301: YEPENEEGFL GSLGKLVVKT GSSVSEMMTG PRKVTPQDFH YHHPQQPNQW PVQESFAIRE EDGPPALEPR SGTNQDKPYL TAQGTNQNRS YYQDCDQYQN
401: QKKRNVNDTE ANRENEIVFG AVQEQDGRRE AMVIKAVDFK EAVNDQRNLR PRINYMGYSS QVY

Best Arabidopsis Sequence Match ( AT5G14890.1 )
(BLAST)

001: MRKNANLLIL FMIFMFFFCG LSSVSAKPPP VKIVSGLVTN VASILWKWLW SLQTSTTTTT TTKSGVSSRS MVKYESGYNM ETVFDGSKLG IEPYAIEVSP
101: NGGELIVLDS ENSNIHKISM PLSRYGKPKL LSGSQEGYTG HVDGKLKEAR MNRPRGLAMD DRGNIYVADT INMAIRKISD DGVSTIAAGG RWSGGSKEES
201: MRFSDDFDLI YVSSSCSLLV IDRGNQLIKE IQLHDHDCSQ PEPDTDSLHL GTALLVAAVF FGYMLALLVR RVRSLFSSSS HDTKSKRHVA TPSMTMAPYQ
301: RYPRPVRQPL IPPQHESEKE EGFLGSLGKL VVKTGSSVSE MMSGSRNVIP PNFHQYHHQQ EPNQWPVQES FAIPEEDGPP ALEPRSGTNP DKPYLRAQGT
401: NQNRSYYQDY DQYQNQQKRN VNDTASFEDN REKNEIVFGA VQEQDGRREA MVIKAVDFNE AINDQRNLRP RINYMGYSSQ VY

Arabidopsis Description

NHL domain-containing protein [Source:TAIR;Acc:AT5G14890]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.