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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 3
  • cytosol 1
  • nucleus 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS7B01G116500.1 Wheat endoplasmic reticulum, plasma membrane, plastid 80.6 95.91
TraesCS7D01G211500.1 Wheat endoplasmic reticulum, plasma membrane, plastid 79.55 95.35
TraesCS7A01G209600.1 Wheat endoplasmic reticulum, plasma membrane 80.3 94.39
Os06t0269300-01 Rice mitochondrion 60.9 78.92
EER89586 Sorghum golgi, plasma membrane 55.97 73.96
Zm00001d045703_P002 Maize plasma membrane 54.33 71.94
Zm00001d037307_P001 Maize plasma membrane, plastid, vacuole 52.99 69.88
HORVU6Hr1G072950.14 Barley golgi 53.13 69.13
GSMUA_Achr10P... Banana endoplasmic reticulum, plasma membrane, plastid 42.69 56.86
VIT_01s0026g00330.t01 Wine grape plasma membrane 40.6 55.4
KRG99307 Soybean golgi 39.7 52.99
VIT_14s0066g01590.t01 Wine grape golgi 39.25 52.39
KRH74622 Soybean plasma membrane 38.51 50.89
Solyc05g005760.2.1 Tomato nucleus 37.91 50.8
PGSC0003DMT400010531 Potato golgi 37.91 50.2
PGSC0003DMT400001332 Potato golgi 37.46 49.9
KRH45706 Soybean plasma membrane 30.9 49.17
KRH69528 Soybean vacuole 37.31 49.12
CDY11605 Canola endoplasmic reticulum, plasma membrane 35.37 48.77
AT1G70280.2 Thale cress plasma membrane 37.01 48.72
Solyc02g087010.2.1 Tomato golgi 36.87 48.72
Bra016227.1-P Field mustard plasma membrane, vacuole 36.72 48.05
CDX68347 Canola endoplasmic reticulum, plasma membrane 34.78 47.75
CDY38803 Canola plasma membrane, vacuole 36.27 47.74
Bra003957.1-P Field mustard plasma membrane 34.63 47.54
CDY23504 Canola plasma membrane 34.63 46.96
KRG93349 Soybean golgi, plasma membrane, vacuole 37.31 46.64
CDY59085 Canola plasma membrane 32.69 46.11
CDY47647 Canola plasma membrane 32.84 45.64
Bra024625.1-P Field mustard plasma membrane 33.58 45.09
Solyc10g018280.1.1 Tomato cytosol 4.78 45.07
CDY09894 Canola golgi, plasma membrane 30.3 43.84
CDX69553 Canola plasma membrane 30.3 43.84
Bra008732.1-P Field mustard plasma membrane 29.85 43.2
Solyc10g018290.1.1 Tomato extracellular 5.52 43.02
AT5G14890.1 Thale cress plasma membrane 30.75 42.74
AT1G23880.1 Thale cress plasma membrane 34.18 42.02
Solyc06g048720.1.1 Tomato endoplasmic reticulum, extracellular 6.57 38.6
HORVU6Hr1G045970.15 Barley endoplasmic reticulum, plasma membrane 22.84 28.92
Protein Annotations
EnsemblPlants:HORVU7Hr1G042740.2EnsemblPlantsGene:HORVU7Hr1G042740Gene3D:2.120.10.30InterPro:6-blade_b-propeller_TolB-likeInterPro:IPR011042ncoils:Coil
PANTHER:PTHR13833PANTHER:PTHR13833:SF59SEG:segSUPFAM:SSF101898UniParc:UPI000B476B75UniProt:A0A287W8R4
MapMan:35.2:::::
Description
No Description!
Coordinates
chrchr7H:+:125372408..125379504
Molecular Weight (calculated)
74593.2 Da
IEP (calculated)
7.964
GRAVY (calculated)
-0.557
Length
670 amino acids
Sequence
(BLAST)
001: PATELHHHHN PVVSSTLCPC FSPLSPSDLC PSLFFSRLLL AESESCRQVP PKEFCILWCS LNLLYLSSNG RLLLIPLPVL TPPLAPHPTL PTCHLCPASW
101: FFAPREDHAM EARAASAAGA RAVAALLVAA LLLGTPVSAS AASSYPAKVL GGLLTSTATA VAKKLWSLKS TARTATTAAA SGRSMVKYEG GYAVETVFDG
201: SSLGIEPHSV EVTPAGDLLL LDSMNSNLYR VQLPLSRYSR PKLVAGSLEG LSGHVDGRLR EAKMNHPKGF TVDDRGNIYV ADAMNMAIRK ISDTGVTTIA
301: GGKSMRGGHM DGPSDDAKFS TDFEIRYIGS SCSLLVIDRG NQAIREIPLQ PDDCEYQDEA GFPLGVALLF AAGFFGYMLA LLQRRVLGMV SATEEPQTPP
401: RPSNASIPPY QPYQQPFKPS FRPPLIPNED EAGKHEAEEG FFTSVGKLMG GAKSSVADMF SRKKRPARQH HQHHQQRRAN PWPVQDSYAI PHEETPPPLD
501: SRGPTPQKNY GFMTTEPEKA HHLRHGQPYL GGWDARGPQQ QQQVYPHHQQ QQQQQQHRQQ LEQQVYRQQQ QQHRQPPEQQ AYHLQQHQQR RQPEQQMYQL
601: QQHRQYSSGP QTFYEQSCET TNEVVFGAVQ EVDSKRRMVE IKAVNYGDTF YEQYGMRYRN NYIGYNSNNY
Best Arabidopsis Sequence Match ( AT1G23880.1 )
(BLAST)
001: MTNVSLFYAS LSILFCCFLF FFNLSPSFFF LRLSRSVTTS FNILNIHLSH FAIRLSSTLV MSRHFLFLGI IILLFSAFVA SAPSSTSPAK IVNSFISNHG
101: TSLLKWLWSL SFKTTTKTAV PTKSMVKFEN GYSVETVLDG SKLGIEPYSI QVLSNGELLI LDSQNSNIYQ ISSSLSLYSR PRLVTGSPEG YPGHVDGRLR
201: DARLNNPKGL TVDDRGNIYV ADTVNNAIRK ISEAGVTTIA GGKMVRGGGH VDGPSEDAKF SNDFDVVYLG SSCSLLVIDR GNQAIREIQL HFDDCADQYG
301: SGFPLGIAVL VAAVFFGYML ALLQRRLSSI VSYHTDQEVF EAVPDQDPIK PVRPPLILTG DEQEKQEESF LGTLQIFISN AWVFSVELFS GMFPGLRKKQ
401: TVGLNFNHQE TKHSAFSTTS WPIQESFVIH NKDEPPPVES RNATPGKIYP FMSKDATEKM QQLRQSRALY RSLDAEFLQE QQQEKHQQYH HRHHSTIPYT
501: LYEQSSEKTN EIVFGPGQEQ DQMNTHQNIH HRAHQFVSYP YGYYS
Arabidopsis Description
At1g23880/T23E23_8 [Source:UniProtKB/TrEMBL;Acc:Q8S9K1]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.