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Rice
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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • plastid 3
  • mitochondrion 4
  • extracellular 2
  • endoplasmic reticulum 2
  • vacuole 2
  • plasma membrane 2
  • golgi 2
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion
Any Predictor:mitochondrion, plastid, secretory
BaCelLo:plastid
iPSORT:mitochondrion
MultiLoc:mitochondrion
Plant-mPloc:plastid
Predotar:secretory
PProwler:secretory
TargetP:mitochondrion
WoLF PSORT:plastid
YLoc:mitochondrion
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
EER89586 Sorghum golgi, plasma membrane 75.44 76.92
Zm00001d045703_P002 Maize plasma membrane 71.95 73.52
TraesCS7B01G116500.1 Wheat endoplasmic reticulum, plasma membrane, plastid 79.11 72.65
Os02t0730400-01 Rice golgi, plasma membrane, vacuole 70.79 72.05
TraesCS7D01G211500.1 Wheat endoplasmic reticulum, plasma membrane, plastid 77.56 71.74
Zm00001d037307_P001 Maize plasma membrane, plastid, vacuole 70.21 71.46
TraesCS7A01G209600.1 Wheat endoplasmic reticulum, plasma membrane 78.14 70.88
HORVU7Hr1G042740.2 Barley plastid 78.92 60.9
GSMUA_Achr10P... Banana endoplasmic reticulum, plasma membrane, plastid 57.25 58.85
VIT_01s0026g00330.t01 Wine grape plasma membrane 54.74 57.64
KRG99307 Soybean golgi 53.97 55.58
VIT_14s0066g01590.t01 Wine grape golgi 53.19 54.78
KRH74622 Soybean plasma membrane 53.19 54.24
KRH69528 Soybean vacuole 51.45 52.26
CDY11605 Canola endoplasmic reticulum, plasma membrane 48.16 51.23
Bra003957.1-P Field mustard plasma membrane 48.36 51.23
Solyc05g005760.2.1 Tomato nucleus 49.52 51.2
AT1G70280.2 Thale cress plasma membrane 50.29 51.08
KRH45706 Soybean plasma membrane 41.59 51.07
CDX68347 Canola endoplasmic reticulum, plasma membrane 48.16 51.02
Bra016227.1-P Field mustard plasma membrane, vacuole 50.29 50.78
PGSC0003DMT400001332 Potato golgi 49.32 50.7
CDY23504 Canola plasma membrane 48.16 50.4
CDY38803 Canola plasma membrane, vacuole 49.52 50.29
PGSC0003DMT400010531 Potato golgi 48.94 50.0
Solyc02g087010.2.1 Tomato golgi 48.74 49.7
CDY59085 Canola plasma membrane 44.68 48.63
CDY47647 Canola plasma membrane 44.87 48.13
KRG93349 Soybean golgi, plasma membrane, vacuole 49.71 47.95
Bra024625.1-P Field mustard plasma membrane 46.03 47.7
CDY09894 Canola golgi, plasma membrane 40.62 45.36
CDX69553 Canola plasma membrane 40.62 45.36
Bra008732.1-P Field mustard plasma membrane 40.43 45.14
Solyc10g018280.1.1 Tomato cytosol 6.19 45.07
AT1G23880.1 Thale cress plasma membrane 47.0 44.59
AT5G14890.1 Thale cress plasma membrane 41.2 44.19
Solyc10g018290.1.1 Tomato extracellular 6.96 41.86
Solyc06g048720.1.1 Tomato endoplasmic reticulum, extracellular 8.12 36.84
Os08t0414600-01 Rice extracellular 16.63 31.27
Os02t0234200-01 Rice endoplasmic reticulum, golgi, plasma membrane 28.24 29.61
Protein Annotations
Gene3D:2.120.10.30MapMan:35.2EntrezGene:4340723InterPro:6-blade_b-propeller_TolB-likeEMBL:AK122070ProteinID:BAD54399.1
ProteinID:BAF19270.1ProteinID:BAS97176.1ProteinID:EEE65497.1GO:GO:0005575GO:GO:0016020GO:GO:0016021
InterPro:IPR011042EnsemblPlantsGene:Os06g0269300EnsemblPlants:Os06t0269300-01PANTHER:PTHR13833PANTHER:PTHR13833:SF59UniProt:Q5Z6M0
SUPFAM:SSF101898SignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI0000447011RefSeq:XP_015644426.1SEG:seg
Description
Six-bladed beta-propeller, TolB-like domain containing protein. (Os06t0269300-01);Six-bladed beta-propeller, TolB-like domain containing protein. (Os06t0269300-02)
Coordinates
chr6:-:8977349..8981633
Molecular Weight (calculated)
57424.9 Da
IEP (calculated)
9.318
GRAVY (calculated)
-0.535
Length
517 amino acids
Sequence
(BLAST)
001: MAVRRRRRRS RAAAVLVAAL LLAASAATAS AASSYPAKVV TGLLSSTASA VVKQLWSLKS TATRTGSAAA GRSMVKYEGG YAVETVFDGS KLGIEPHDVE
101: VTPSGELLVL DSMNSNVYRV QLPLSRYSRP KLVAGSPEGL SGHVDGRLRE AKMNHPKGFT VDDRGNIYVA DAMNMAIRKI SDTGVTTIAG GKSMRGGHLD
201: GPSDDAKFST DFEIRYISSS CSLLVIDRGN QAIREIALHN DDCEYQYEAG FPLGIALLFA AGFFGYMLAL LQRQVLGMVS TADEPQTPPR PSIASIPPYQ
301: KPLKPSLRPP LIPTEDQAGK HEAEEGFFTS IGKLIGGAKS SAVEIFSRKK RPTHQYHHHL QQQRANPWPV QESYAIPHDE TPPPLDMRAA TPRKNYAFMT
401: KEPEKVHHVR HGRPYFNGWD MQHAPQQQPE QQMYHQQHLQ QHRQYSAGPQ TFYEQSCETT NEIVFGAVQE VDTKRRMVEI KAVNYGDTFY EQYGMRYRNN
501: YIGYNNSSNG NNNSYYY
Best Arabidopsis Sequence Match ( AT1G70280.2 )
(BLAST)
001: MGRDFLVLSI LILLLSGIVS SAPSANSPAK ILNGFISNHG SSLMKWLWSL KTTTKTTIAT RSMVKFENGY SVETVFDGSK LGIEPYSIEV LPNGELLILD
101: SENSNIYKIS SSLSLYSRPR LVTGSPEGYP GHVDGRLRDA KLNHPKGLTV DDRGNIYVAD TVNNAIRKIS EGGVTTIAGG KTVRNGGHVD GPSEDAKFSN
201: DFDVVYVGSS CSLLVIDRGN KAIREIQLHF DDCAYQYGSG FPLGIAVLVA AGFFGYMLAL LQRRVGSIVS SHNDQEMFEA DPDQKPMKHS RPSLIPAGDE
301: QLEKQEETFV VSLGKLVSNA WESVMEILRK KQTGTSFQQY HGTTKQSAAF STSTPWPIQE SFVIRDEDGP PPVEPRNPTP RKTYAFMSKD AEKMQQLRQS
401: RAFYSSWDAE FPNQQQQQQK QHQKHQHQQQ QQQQHRRHYS SIPHTYYEQD SEKSNEIVFG AVQEQSSKRV AKPKPKPIES GDQMNNNTQQ NLHYRSHSVS
501: YPYGYYPNT
Arabidopsis Description
NHL domain-containing protein [Source:UniProtKB/TrEMBL;Acc:F4I5D7]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.