Factsheet for Os08t0414600-01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 6
vacuole 5
plasma membrane 6
golgi 5
cytosol 1
plastid 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	secretory
EpiLoc:	cytosol
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	extracellular, nucleus, plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	plasma membrane

extracellular: 19226311

msms PMID: 19226311 doi

WK Cho, XY Chen, H Chu, Y Rim, S Kim, ST Kim, SW Kim, ZY Park, JY Kim

Division of Applied Life Science (BK21 Program), Graduate School, Environmental Biotechnology National Core Research Center, PMBBRC, Gyeongsang National University, Jinju, Korea.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY47648	Canola	extracellular	37.45	39.46
Zm00001d032308_P001	Maize	endoplasmic reticulum, extracellular, golgi	57.09	37.56
TraesCS2B01G153900.1	Wheat	extracellular, plasma membrane, vacuole	54.55	37.31
EES13823	Sorghum	endoplasmic reticulum, golgi, plasma membrane	56.0	37.02
TraesCS2D01G133600.2	Wheat	extracellular, golgi, plasma membrane	54.55	35.21
TraesCS2A01G131500.2	Wheat	extracellular, golgi, plasma membrane	53.45	34.92
Bra024626.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	38.91	28.69
CDY25806	Canola	extracellular, plasma membrane, vacuole	18.18	28.25
CDY59087	Canola	endoplasmic reticulum, extracellular, plasma membrane	37.09	27.35
AT1G23890.2	Thale cress	extracellular	38.91	26.75
KRH45709	Soybean	endoplasmic reticulum	36.0	24.75
Solyc05g005770.2.1	Tomato	nucleus	33.45	23.12
VIT_01s0026g00320.t01	Wine grape	endoplasmic reticulum, extracellular, plasma membrane	36.73	23.06
PGSC0003DMT400010568	Potato	extracellular	32.73	22.44
Os02t0234200-01	Rice	endoplasmic reticulum, golgi, plasma membrane	35.64	19.88
Os02t0730400-01	Rice	golgi, plasma membrane, vacuole	34.55	18.7
Os06t0269300-01	Rice	mitochondrion	31.27	16.63

Protein Annotations

Gene3D:2.120.10.30	MapMan:35.2	EntrezGene:4345572	InterPro:6-blade_b-propeller_TolB-like	EMBL:AK101578	EMBL:AK101579
ProteinID:BAC99711.1	ProteinID:BAF23718.1	ProteinID:BAT05427.1	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:IPR011042	EnsemblPlantsGene:Os08g0414600	EnsemblPlants:Os08t0414600-01	PANTHER:PTHR13833	PANTHER:PTHR13833:SF71	UniProt:Q6Z549
SUPFAM:SSF101898	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI00001D8DD0	RefSeq:XP_015649994.1	SEG:seg

Description

Six-bladed beta-propeller, TolB-like domain containing protein. (Os08t0414600-01)

Coordinates

chr8:+:19826775..19829667

Molecular Weight (calculated)

28571.0 Da

IEP (calculated)

6.873

GRAVY (calculated)

-0.046

Length

275 amino acids

Sequence
(BLAST)

001: MAAASPPPLA LLTLTLSLTL SLASAGLVLD DGYTVTTAAD LNHPGAPAAP HPYALLPRPR AGDLVLLDSA ASALYTLALP LSGGAAARTL AGGGGGPAGF
101: ADGEPRDAAF DRPRSLAVDH ADNVYVADRM NGAVRKIAPS GFTTTIAGGR SKGPGRKDGP AQNATFSSDF ELVYVPKMCA LLVTDRGNRL IRQINLKQED
201: CARETQPGLG TTSVSIIAVL CALLGSVIGF SIRHFYPAHA GSLHQPLFQE DADAVQDNPE DGRSDQLLRH QKRSC

Best Arabidopsis Sequence Match ( AT1G23890.1 )
(BLAST)

001: MAWGFSSVSL FLFVVFNLVS GKIVLEEGYE VTTVVDGHKS GLNPYTIHAL PGSSNLIVLD SSGSTFYTTS FPLSVDSVIN RFAGDGSSGH VDGKAGNSRF
101: SKPRGFAVDA KGNVYVADKS NKAIRKISSS GSVTTIAGGI SKAFGHRDGP AQNATFSSDF EITFVPQRCC LLVSDHGNEM IRQINLKEED CLENSHSNLG
201: TYSLWSIGIV LSCILGVAIG FAVRPYVIRH TGRSEPPLVH HDMEASPNQI GGTSSDLLLL H

Arabidopsis Description

NHL domain-containing protein [Source:UniProtKB/TrEMBL;Acc:F4I7N5]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.