Factsheet for Os02t0234200-01

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, golgi, plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 6
vacuole 5
plasma membrane 6
golgi 6
cytosol 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, golgi, plasma membrane
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	secretory
EpiLoc:	cytosol
iPSORT:	secretory
MultiLoc:	golgi
Plant-mPloc:	nucleus
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G235400.1	Wheat	endoplasmic reticulum	78.3	78.3
TraesCS6D01G181800.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	77.69	77.69
TraesCS6A01G194600.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	76.88	76.88
VIT_13s0106g00480.t01	Wine grape	cytosol	11.36	75.68
HORVU6Hr1G045970.15	Barley	endoplasmic reticulum, plasma membrane	79.51	74.1
OQU84683	Sorghum	golgi	72.01	71.72
Zm00001d016228_P001	Maize	plasma membrane	72.21	69.13
VIT_13s0106g00460.t01	Wine grape	cytosol	20.69	68.92
GSMUA_Achr7P13840_001	Banana	golgi	60.65	62.68
VIT_19s0014g01010.t01	Wine grape	endoplasmic reticulum, golgi, plasma membrane	49.29	50.21
KRH21938	Soybean	vacuole	48.28	47.32
Solyc07g062300.2.1	Tomato	plasma membrane	45.44	46.76
PGSC0003DMT400018285	Potato	endoplasmic reticulum	44.62	45.93
Bra001570.1-P	Field mustard	plastid	44.22	44.22
CDX82461	Canola	endoplasmic reticulum	43.81	43.99
KRH27368	Soybean	plastid	38.13	43.82
CDX75794	Canola	plastid	42.8	42.8
AT3G14860.2	Thale cress	plastid, vacuole	41.99	41.99
Os08t0414600-01	Rice	extracellular	19.88	35.64
Os02t0730400-01	Rice	golgi, plasma membrane, vacuole	31.44	30.51
Os06t0269300-01	Rice	mitochondrion	29.61	28.24

Protein Annotations

Gene3D:2.120.10.30	MapMan:35.2	EntrezGene:4328817	InterPro:6-blade_b-propeller_TolB-like	ProteinID:AIQ80954.1	ProteinID:BAD27660.1
ProteinID:BAF08292.1	ProteinID:BAS77803.1	ProteinID:EEE56619.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR011042	InterPro:IPR013017	EMBL:KF736096	InterPro:NHL_repeat	InterPro:NHL_repeat_subgr	EnsemblPlantsGene:Os02g0234200
EnsemblPlants:Os02t0234200-01	PFAM:PF01436	PFscan:PS51125	PANTHER:PTHR13833	PANTHER:PTHR13833:SF73	UniProt:Q6EUK9
SUPFAM:SSF101898	SignalP:SignalP-noTM	UniParc:UPI00003CE495	RefSeq:XP_015622713.1	SEG:seg	:

Description

FUWA, OsFUWANHL domain-containing protein, Determination of panicle architecture, grain shape and grain weight (Os02t0234200-01)

Coordinates

chr2:+:7594952..7599868

Molecular Weight (calculated)

53297.9 Da

IEP (calculated)

7.544

GRAVY (calculated)

-0.428

Length

493 amino acids

Sequence
(BLAST)

001: MASLLLLLLL VLSLAAVHTD AAAFPSPADS IVRQLSSVVK WPRVPSSSSS SSHGHKQPSH PQYDGGVALQ FESGYFVETL VEGDKLGVTP HTIRVSPVEG
101: GELLAVDSAH SNIVRITPPL SEYSRGRLVA GSFQGHSGHI DGKPSDARFK RPTGVAVDDT GNVYVADTAN LAIRKIGESG VTTIAGGKSN IPGYRDGPSE
201: DAKFSTDFDV VYVKKMCSLL VIDRGNAALR KIALPQEDCT YQDATLLSSD IILVIGAVVA GYIFSVVQHG FGSSTAEKIE APEDEHQESS TVGKPPLVVE
301: SLKEEPSAGW PSLGTLIGDL LKLVIEGVGN QLLRLVPSRL QHGKRKTDLT PLKDRLVMPE DTEETPVAQK LSSTPMRPET LHGPNPVNET APKAQKSVKS
401: SKFRDSTLSS KHRSSKRQEY AEFYGSSETP QVSSKVPKDR LRHRHREKSG EAVYGTSHPE PKPAEVKPAD YSDPKYDPYN IRSKYGADSG YRY

Best Arabidopsis Sequence Match ( AT3G14860.2 )
(BLAST)

001: MGKSQILLNA ESFTCSSFNT FFTLWIFFTL HSFPFQAQAA PSGSLIKHMS SVLKWTTGSS SKLSQSDTNV LQFENGYLVE TVVEGNDIGV VPYKIRVSDD
101: GELYAVDELN SNIMKITPPL SQYSRGRLVA GSFQGKTGHA DGKPSEARFN HPRGVTMDDK GNVYVADTLN LAIRKIGDSG VTTIAGGKSN IAGYRDGPSE
201: DAKFSNDFDV VYVRPTCSLL VIDRGNAALR QISLSEEDCD YQDDSSISLT DILLVIGAVL IGYATCMLQQ GFGNSFFSKT QVGSETSYEE EHPGKEKLSR
301: PVHEKTITKE EPGWPSFGQL LTDLCKLALE FITSHLVPAR FQTNPNLRPL KDRLIMPEDE QEPPRVQRHT APAPISESRH AHLPKADDSY PEHKTPKLRS
401: SSVMKDPTLS SSKHHRTSSK RQDYAQFYAS GEVAQPKIHK ERSRRRHRDK TTETEPKPTP SDTVKPVEYS NSSKFDHYNM RSSKYGPETP FRF

Arabidopsis Description

NHL domain-containing protein [Source:UniProtKB/TrEMBL;Acc:F4IXC9]
SUBAcon: [plastid,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.