Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 2
- extracellular 5
- golgi 4
- plasma membrane 6
- endoplasmic reticulum 4
- vacuole 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY47647 | Canola | plasma membrane | 92.21 | 90.87 |
| Bra024625.1-P | Field mustard | plasma membrane | 94.11 | 89.58 |
| AT1G23880.1 | Thale cress | plasma membrane | 79.37 | 69.17 |
| CDY11605 | Canola | endoplasmic reticulum, plasma membrane | 70.74 | 69.14 |
| CDX68347 | Canola | endoplasmic reticulum, plasma membrane | 70.95 | 69.06 |
| CDY23504 | Canola | plasma membrane | 71.79 | 69.03 |
| CDY38803 | Canola | plasma membrane, vacuole | 70.95 | 66.21 |
| VIT_01s0026g00330.t01 | Wine grape | plasma membrane | 60.84 | 58.86 |
| KRG99307 | Soybean | golgi | 58.11 | 54.98 |
| Solyc05g005760.2.1 | Tomato | nucleus | 54.74 | 52.0 |
| PGSC0003DMT400010531 | Potato | golgi | 54.95 | 51.58 |
| KRH74622 | Soybean | plasma membrane | 54.53 | 51.08 |
| KRH69528 | Soybean | vacuole | 52.21 | 48.72 |
| Os02t0730400-01 | Rice | golgi, plasma membrane, vacuole | 51.37 | 48.03 |
| KRH45706 | Soybean | plasma membrane | 42.53 | 47.98 |
| TraesCS6A01G291600.1 | Wheat | plasma membrane | 50.32 | 47.61 |
| TraesCS6B01G322100.1 | Wheat | plasma membrane | 50.11 | 47.41 |
| TraesCS6D01G272900.2 | Wheat | plasma membrane | 49.89 | 47.21 |
| GSMUA_Achr3P12850_001 | Banana | endoplasmic reticulum | 47.79 | 47.0 |
| HORVU6Hr1G072950.14 | Barley | golgi | 50.32 | 46.41 |
| Zm00001d017926_P003 | Maize | golgi | 49.47 | 46.08 |
| EES07314 | Sorghum | golgi, plasma membrane, vacuole | 49.89 | 45.75 |
| Os06t0269300-01 | Rice | mitochondrion | 48.63 | 44.68 |
| Zm00001d051759_P001 | Maize | golgi, plasma membrane, plastid | 48.42 | 44.57 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum, plasma membrane, plastid | 45.89 | 43.34 |
| EER89586 | Sorghum | golgi, plasma membrane | 45.47 | 42.6 |
| Zm00001d037307_P001 | Maize | plasma membrane, plastid, vacuole | 45.47 | 42.52 |
| Zm00001d045703_P002 | Maize | plasma membrane | 44.63 | 41.9 |
| CDX69553 | Canola | plasma membrane | 40.0 | 41.04 |
| CDY09894 | Canola | golgi, plasma membrane | 38.74 | 39.74 |
| TraesCS7D01G211500.1 | Wheat | endoplasmic reticulum, plasma membrane, plastid | 45.47 | 38.64 |
| TraesCS7B01G116500.1 | Wheat | endoplasmic reticulum, plasma membrane, plastid | 45.68 | 38.54 |
| TraesCS7A01G209600.1 | Wheat | endoplasmic reticulum, plasma membrane | 45.47 | 37.89 |
| CDY47648 | Canola | extracellular | 18.53 | 33.72 |
| HORVU7Hr1G042740.2 | Barley | plastid | 46.11 | 32.69 |
| CDX82461 | Canola | endoplasmic reticulum | 31.16 | 30.14 |
| CDX75794 | Canola | plastid | 30.32 | 29.21 |
| CDY25806 | Canola | extracellular, plasma membrane, vacuole | 10.53 | 28.25 |
| CDY59087 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 20.42 | 26.01 |
Protein Annotations
| Gene3D:2.120.10.30 | MapMan:35.2 | InterPro:6-blade_b-propeller_TolB-like | GO:A0A078J703 | UniProt:A0A078J703 | EnsemblPlants:CDY59085 |
| ProteinID:CDY59085 | ProteinID:CDY59085.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
| GO:GO:0016020 | GO:GO:0016021 | EnsemblPlantsGene:GSBRNA2T00025512001 | InterPro:IPR011042 | InterPro:NHL_repeat | PFAM:PF01436 |
| PANTHER:PTHR13833 | PANTHER:PTHR13833:SF42 | SUPFAM:SSF101898 | TMHMM:TMhelix | UniParc:UPI0004EE4342 | SEG:seg |
Description
BnaA09g54600DBnaA09g54600D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J703]
Coordinates
chrLK033724:+:14906..17396
Molecular Weight (calculated)
53080.0 Da
IEP (calculated)
7.081
GRAVY (calculated)
-0.343
Length
475 amino acids
Sequence
(BLAST)
(BLAST)
001: MKRDYFLFLG IIIIIIILLF SGLVASAPSS TSPAKIVSGF ISNHGTSLMK WLWSLKTTSK KTAVSTKSMV KFENGYSVET VLDGSKLGIE PYSLQVLPNG
101: ELLILDSENS NVYKISSSLS LYSRPRLVTG SPEGYPGHVD GRLRDARLNN PKGLTVDDRG NIYVADTVNN AIRKISEGGV TTIAGGKIVR GGGGHVDGPS
201: EDAKFSNDFD VVYVGSSCSL LVVDRGNRAI REIQLHFDDC AYEYGSGFPL GIAVLIAAGF FGYMLALLQR RLGSILSYHT DQEIYKAVPD QKPLKPVRPS
301: LIQTGDEQEE QEESFLVPLR VFMSNARLFL AELFSGIFNF NHQEMNHSSA YSTAPWPIQE SFVIHNKDEP PPPIETRNLT PKKTYPFMAK DAESIQQLRR
401: SRSLFRSLDS EFQQEQQHHR RHHSTTPHTH YEKISGKTNE IVFGPPMECE DQMNSHQNLY YRADQSVSYG NYSYT
101: ELLILDSENS NVYKISSSLS LYSRPRLVTG SPEGYPGHVD GRLRDARLNN PKGLTVDDRG NIYVADTVNN AIRKISEGGV TTIAGGKIVR GGGGHVDGPS
201: EDAKFSNDFD VVYVGSSCSL LVVDRGNRAI REIQLHFDDC AYEYGSGFPL GIAVLIAAGF FGYMLALLQR RLGSILSYHT DQEIYKAVPD QKPLKPVRPS
301: LIQTGDEQEE QEESFLVPLR VFMSNARLFL AELFSGIFNF NHQEMNHSSA YSTAPWPIQE SFVIHNKDEP PPPIETRNLT PKKTYPFMAK DAESIQQLRR
401: SRSLFRSLDS EFQQEQQHHR RHHSTTPHTH YEKISGKTNE IVFGPPMECE DQMNSHQNLY YRADQSVSYG NYSYT
001: MTNVSLFYAS LSILFCCFLF FFNLSPSFFF LRLSRSVTTS FNILNIHLSH FAIRLSSTLV MSRHFLFLGI IILLFSAFVA SAPSSTSPAK IVNSFISNHG
101: TSLLKWLWSL SFKTTTKTAV PTKSMVKFEN GYSVETVLDG SKLGIEPYSI QVLSNGELLI LDSQNSNIYQ ISSSLSLYSR PRLVTGSPEG YPGHVDGRLR
201: DARLNNPKGL TVDDRGNIYV ADTVNNAIRK ISEAGVTTIA GGKMVRGGGH VDGPSEDAKF SNDFDVVYLG SSCSLLVIDR GNQAIREIQL HFDDCADQYG
301: SGFPLGIAVL VAAVFFGYML ALLQRRLSSI VSYHTDQEVF EAVPDQDPIK PVRPPLILTG DEQEKQEESF LGTLQIFISN AWVFSVELFS GMFPGLRKKQ
401: TVGLNFNHQE TKHSAFSTTS WPIQESFVIH NKDEPPPVES RNATPGKIYP FMSKDATEKM QQLRQSRALY RSLDAEFLQE QQQEKHQQYH HRHHSTIPYT
501: LYEQSSEKTN EIVFGPGQEQ DQMNTHQNIH HRAHQFVSYP YGYYS
101: TSLLKWLWSL SFKTTTKTAV PTKSMVKFEN GYSVETVLDG SKLGIEPYSI QVLSNGELLI LDSQNSNIYQ ISSSLSLYSR PRLVTGSPEG YPGHVDGRLR
201: DARLNNPKGL TVDDRGNIYV ADTVNNAIRK ISEAGVTTIA GGKMVRGGGH VDGPSEDAKF SNDFDVVYLG SSCSLLVIDR GNQAIREIQL HFDDCADQYG
301: SGFPLGIAVL VAAVFFGYML ALLQRRLSSI VSYHTDQEVF EAVPDQDPIK PVRPPLILTG DEQEKQEESF LGTLQIFISN AWVFSVELFS GMFPGLRKKQ
401: TVGLNFNHQE TKHSAFSTTS WPIQESFVIH NKDEPPPVES RNATPGKIYP FMSKDATEKM QQLRQSRALY RSLDAEFLQE QQQEKHQQYH HRHHSTIPYT
501: LYEQSSEKTN EIVFGPGQEQ DQMNTHQNIH HRAHQFVSYP YGYYS
Arabidopsis Description
At1g23880/T23E23_8 [Source:UniProtKB/TrEMBL;Acc:Q8S9K1]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.