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Maize
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Maize
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, golgi, plastid

Predictor Summary:
  • plastid 2
  • extracellular 3
  • endoplasmic reticulum 3
  • vacuole 3
  • plasma membrane 4
  • golgi 4
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:golgi, plasma membrane, plastid
Any Predictor:mitochondrion, plastid, secretory
ChloroP:plastid
iPSORT:secretory
MultiLoc:golgi
Predotar:secretory
PProwler:secretory
TargetP:mitochondrion
WoLF PSORT:plasma membrane
YLoc:plastid
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
EES07314 Sorghum golgi, plasma membrane, vacuole 92.64 92.28
Zm00001d017926_P003 Maize golgi 90.31 91.37
TraesCS6A01G291600.1 Wheat plasma membrane 79.26 81.47
TraesCS6D01G272900.2 Wheat plasma membrane 78.49 80.68
TraesCS6B01G322100.1 Wheat plasma membrane 78.29 80.48
Os02t0730400-01 Rice golgi, plasma membrane, vacuole 79.07 80.31
HORVU6Hr1G072950.14 Barley golgi 78.49 78.64
Zm00001d045703_P002 Maize plasma membrane 59.69 60.87
Zm00001d037307_P001 Maize plasma membrane, plastid, vacuole 58.72 59.65
GSMUA_Achr10P... Banana endoplasmic reticulum, plasma membrane, plastid 58.14 59.64
VIT_01s0026g00330.t01 Wine grape plasma membrane 54.65 57.43
KRH74622 Soybean plasma membrane 55.04 56.02
KRG99307 Soybean golgi 53.68 55.18
KRH69528 Soybean vacuole 52.71 53.44
VIT_14s0066g01590.t01 Wine grape golgi 51.94 53.39
Solyc05g005760.2.1 Tomato nucleus 50.58 52.2
PGSC0003DMT400001332 Potato golgi 50.78 52.09
AT1G70280.2 Thale cress plasma membrane 51.16 51.87
CDY11605 Canola endoplasmic reticulum, plasma membrane 48.84 51.85
Solyc02g087010.2.1 Tomato golgi 50.58 51.48
PGSC0003DMT400010531 Potato golgi 50.19 51.19
Bra016227.1-P Field mustard plasma membrane, vacuole 50.78 51.17
CDY38803 Canola plasma membrane, vacuole 50.39 51.08
CDX68347 Canola endoplasmic reticulum, plasma membrane 47.48 50.2
Bra003957.1-P Field mustard plasma membrane 47.29 50.0
KRH45706 Soybean plasma membrane 40.5 49.64
CDY23504 Canola plasma membrane 47.29 49.39
CDY47647 Canola plasma membrane 45.54 48.76
CDY59085 Canola plasma membrane 44.57 48.42
Bra024625.1-P Field mustard plasma membrane 46.32 47.9
Solyc10g018280.1.1 Tomato cytosol 6.59 47.89
Solyc10g018290.1.1 Tomato extracellular 7.95 47.67
KRG93349 Soybean golgi, plasma membrane, vacuole 48.45 46.64
CDY09894 Canola golgi, plasma membrane 40.31 44.92
Bra008732.1-P Field mustard plasma membrane 39.92 44.49
CDX69553 Canola plasma membrane 39.73 44.28
AT1G23880.1 Thale cress plasma membrane 46.51 44.04
AT5G14890.1 Thale cress plasma membrane 39.73 42.53
Solyc06g048720.1.1 Tomato endoplasmic reticulum, extracellular 8.72 39.47
Zm00001d016228_P001 Maize plasma membrane 28.29 28.35
Zm00001d032308_P001 Maize endoplasmic reticulum, extracellular, golgi 18.6 22.97
Protein Annotations
EnsemblPlants:Zm00001d051759_P001EnsemblPlants:Zm00001d051759_T001EnsemblPlantsGene:Zm00001d051759Gene3D:2.120.10.30GO:GO:0005575GO:GO:0016020
GO:GO:0016021InterPro:6-blade_b-propeller_TolB-likeInterPro:IPR011042PANTHER:PTHR13833PANTHER:PTHR13833:SF59ProteinID:AQK55091.1
SEG:segSignalP:SignalP-noTMSUPFAM:SSF101898TMHMM:TMhelixUniParc:UPI000220C94EUniProt:K7U0I4
MapMan:35.2:::::
Description
NHL domain-containing protein
Coordinates
chr4:+:168950986..168955422
Molecular Weight (calculated)
56118.7 Da
IEP (calculated)
9.318
GRAVY (calculated)
-0.423
Length
516 amino acids
Sequence
(BLAST)
001: MATKGGNARG VPVGALLVAA LLLSSLVPTS ASSYPARVVS GFLSNAASAV VKRLWSLKST TKTAASGGKS MVKYEGGYTV ETVFDGSKLG IEPYSVEVTQ
101: SGELLVMDSM NSNIYRMALP LSRYSRPKLV AGSPEGFPGH VDGKLREARM NHPKGFTVDD KGNIYVADAM NMAIRKISDT GVTTIAGGKS GRGGHVDGPS
201: DEAKFSTDFE VRYIGSSCSL LVIDRGNQAI REIQLHFDDC VYQYEAGFPL GVALLLAAAF FGYMLALLQR RVLGMYSNGD EQEDESPVKA KLSSIPPPYQ
301: KPLKSSLRPP LIPNDDEPVK QEEEGLFTSI GKLVGVARSS VAEIVGATFS RKKRVNVHHH QLGRPTSWPV QESYAIPRDE TPPPLDTRAP TPRKSYAFMS
401: KEPEKIHHIR HGRPQSHGWT GEAAAAPQQQ AASLPPQQQQ QQQQVHHQQY HNRQYSAGPQ TFYEPSCDAA KEIVFGAVQE GDTGRRRPVE IKPVNHGDVA
501: PFELNGLRFR SSYGMG
Best Arabidopsis Sequence Match ( AT1G70280.2 )
(BLAST)
001: MGRDFLVLSI LILLLSGIVS SAPSANSPAK ILNGFISNHG SSLMKWLWSL KTTTKTTIAT RSMVKFENGY SVETVFDGSK LGIEPYSIEV LPNGELLILD
101: SENSNIYKIS SSLSLYSRPR LVTGSPEGYP GHVDGRLRDA KLNHPKGLTV DDRGNIYVAD TVNNAIRKIS EGGVTTIAGG KTVRNGGHVD GPSEDAKFSN
201: DFDVVYVGSS CSLLVIDRGN KAIREIQLHF DDCAYQYGSG FPLGIAVLVA AGFFGYMLAL LQRRVGSIVS SHNDQEMFEA DPDQKPMKHS RPSLIPAGDE
301: QLEKQEETFV VSLGKLVSNA WESVMEILRK KQTGTSFQQY HGTTKQSAAF STSTPWPIQE SFVIRDEDGP PPVEPRNPTP RKTYAFMSKD AEKMQQLRQS
401: RAFYSSWDAE FPNQQQQQQK QHQKHQHQQQ QQQQHRRHYS SIPHTYYEQD SEKSNEIVFG AVQEQSSKRV AKPKPKPIES GDQMNNNTQQ NLHYRSHSVS
501: YPYGYYPNT
Arabidopsis Description
NHL domain-containing protein [Source:UniProtKB/TrEMBL;Acc:F4I5D7]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.