Factsheet for HORVU6Hr1G072950.14

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

plastid 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	mitochondrion, plastid, secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	golgi
TargetP:	mitochondrion
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G322100.1	Wheat	plasma membrane	94.56	97.01
TraesCS6D01G272900.2	Wheat	plasma membrane	94.37	96.81
TraesCS6A01G291600.1	Wheat	plasma membrane	94.37	96.81
Os02t0730400-01	Rice	golgi, plasma membrane, vacuole	85.24	86.42
EES07314	Sorghum	golgi, plasma membrane, vacuole	79.22	78.76
Zm00001d051759_P001	Maize	golgi, plasma membrane, plastid	78.64	78.49
Zm00001d017926_P003	Maize	golgi	77.28	78.04
GSMUA_Achr10P...	Banana	endoplasmic reticulum, plasma membrane, plastid	61.16	62.62
VIT_01s0026g00330.t01	Wine grape	plasma membrane	57.09	59.88
KRH74622	Soybean	plasma membrane	57.48	58.38
KRG99307	Soybean	golgi	55.92	57.37
KRH69528	Soybean	vacuole	55.53	56.19
VIT_14s0066g01590.t01	Wine grape	golgi	53.98	55.38
AT1G70280.2	Thale cress	plasma membrane	54.17	54.81
CDY11605	Canola	endoplasmic reticulum, plasma membrane	51.07	54.12
Solyc05g005760.2.1	Tomato	nucleus	52.43	54.0
CDY38803	Canola	plasma membrane, vacuole	53.2	53.83
Bra016227.1-P	Field mustard	plasma membrane, vacuole	53.4	53.71
PGSC0003DMT400001332	Potato	golgi	52.04	53.28
PGSC0003DMT400010531	Potato	golgi	52.23	53.16
HORVU7Hr1G042740.2	Barley	plastid	69.13	53.13
CDX68347	Canola	endoplasmic reticulum, plasma membrane	50.1	52.87
Bra003957.1-P	Field mustard	plasma membrane	49.9	52.66
CDY23504	Canola	plasma membrane	50.29	52.43
Solyc02g087010.2.1	Tomato	golgi	51.26	52.07
KRH45706	Soybean	plasma membrane	42.52	52.02
CDY59085	Canola	plasma membrane	46.41	50.32
Bra024625.1-P	Field mustard	plasma membrane	47.96	49.5
CDY47647	Canola	plasma membrane	46.21	49.38
KRG93349	Soybean	golgi, plasma membrane, vacuole	49.9	47.95
CDX69553	Canola	plasma membrane	40.97	45.57
AT1G23880.1	Thale cress	plasma membrane	47.96	45.32
Solyc10g018280.1.1	Tomato	cytosol	6.21	45.07
Bra008732.1-P	Field mustard	plasma membrane	40.19	44.71
AT5G14890.1	Thale cress	plasma membrane	41.75	44.61
CDY09894	Canola	golgi, plasma membrane	40.0	44.49
Solyc10g018290.1.1	Tomato	extracellular	7.38	44.19
Solyc06g048720.1.1	Tomato	endoplasmic reticulum, extracellular	8.74	39.47
HORVU6Hr1G045970.15	Barley	endoplasmic reticulum, plasma membrane	29.32	28.54

Protein Annotations

EnsemblPlants:HORVU6Hr1G072950.14	EnsemblPlantsGene:HORVU6Hr1G072950	Gene3D:2.120.10.30	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:6-blade_b-propeller_TolB-like	InterPro:IPR011042	PANTHER:PTHR13833	PANTHER:PTHR13833:SF59	SEG:seg	SignalP:SignalP-noTM
SUPFAM:SSF101898	TMHMM:TMhelix	UniParc:UPI000B46B4DE	UniProt:A0A287UN73	MapMan:35.2	:

Description

No Description!

Coordinates

chrchr6H:-:506384182..506388087

Molecular Weight (calculated)

55941.4 Da

IEP (calculated)

9.262

GRAVY (calculated)

-0.389

Length

515 amino acids

Sequence
(BLAST)

001: GGGRMGAARG RVAALLVAAL LLGAFAPPAS AASYPAKVVS GFLSNAASAV LKRLWSLKST AKTAASGAKS MVKYEGGYTV ETVFDGSKLG IEPYAVEVTQ
101: GGELLVMDSM NSNIYRIALP LSRYSRPKLV AGSPEGIPGH IDGRLREAKM NHPKGFTVDG RGNIYVADAM NMAVRKISDT GVTTIAGGKS SRGGHVDGPS
201: DDAKFSTDFE VRYIASSCSL LVIDRGNQAI REIQLNFDDC VYQYEAGFPL GVALLLAAGF FGYMLALLQR RVLGMVSTED VGHAELQTPM KASIASIPPY
301: QIQKPLKPSL RPPLIPNEDE SEKPEVEEGF FTSLGKLIGG AKSSVAEIVG AAFSRKKRPS VHHYQQGRSG SWPVQESYAI PRDETPPVVD TRTPTPRKNY
401: AFMSKEPEKI HHIRQGRAPY NGWNNGESPQ QQQQQQQQQH QQVHHQQYLQ HNRQYSLGPQ TFYEPSCEAT NEIVFGAVQE VDSARRAVEI KPVNYGDAAA
501: YEQSGLRYRS GGYMG

Best Arabidopsis Sequence Match ( AT1G70280.2 )
(BLAST)

001: MGRDFLVLSI LILLLSGIVS SAPSANSPAK ILNGFISNHG SSLMKWLWSL KTTTKTTIAT RSMVKFENGY SVETVFDGSK LGIEPYSIEV LPNGELLILD
101: SENSNIYKIS SSLSLYSRPR LVTGSPEGYP GHVDGRLRDA KLNHPKGLTV DDRGNIYVAD TVNNAIRKIS EGGVTTIAGG KTVRNGGHVD GPSEDAKFSN
201: DFDVVYVGSS CSLLVIDRGN KAIREIQLHF DDCAYQYGSG FPLGIAVLVA AGFFGYMLAL LQRRVGSIVS SHNDQEMFEA DPDQKPMKHS RPSLIPAGDE
301: QLEKQEETFV VSLGKLVSNA WESVMEILRK KQTGTSFQQY HGTTKQSAAF STSTPWPIQE SFVIRDEDGP PPVEPRNPTP RKTYAFMSKD AEKMQQLRQS
401: RAFYSSWDAE FPNQQQQQQK QHQKHQHQQQ QQQQHRRHYS SIPHTYYEQD SEKSNEIVFG AVQEQSSKRV AKPKPKPIES GDQMNNNTQQ NLHYRSHSVS
501: YPYGYYPNT

Arabidopsis Description

NHL domain-containing protein [Source:UniProtKB/TrEMBL;Acc:F4I5D7]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.