CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 2
plasma membrane 2
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, mitochondrion, nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	plasma membrane
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG92233	Soybean	plasma membrane	95.41	95.96
KRH71877	Soybean	cytosol	23.71	86.11
VIT_16s0039g02700.t01	Wine grape	plasma membrane	80.11	79.21
PGSC0003DMT400021507	Potato	plasma membrane	76.48	76.63
Solyc03g093990.2.1	Tomato	plasma membrane	76.29	76.44
AT5G51150.1	Thale cress	nucleus, peroxisome, plasma membrane, plastid	74.0	72.88
CDY05839	Canola	nucleus, peroxisome, plasma membrane	72.85	72.85
CDX71692	Canola	nucleus, peroxisome, plasma membrane	72.66	72.66
CDY32637	Canola	plastid	71.32	70.51
CDY38855	Canola	plastid	71.13	70.32
Bra029183.1-P	Field mustard	plastid	70.94	70.13
HORVU2Hr1G051560.3	Barley	cytosol, peroxisome	65.77	69.78
Os07t0494900-01	Rice	endoplasmic reticulum	24.67	68.98
GSMUA_Achr8P14960_001	Banana	plasma membrane, plastid	62.14	68.71
EER97254	Sorghum	plastid	71.51	67.39
Zm00001d000436_P001	Maize	plastid	70.75	67.03
TraesCS2D01G236700.1	Wheat	plastid	68.64	65.87
TraesCS2B01G254400.1	Wheat	plastid	68.83	65.81
TraesCS2A01G226700.1	Wheat	plastid	68.64	65.63
Bra035727.1-P	Field mustard	plastid	72.47	61.73
KRH12626	Soybean	cytosol	19.89	20.8
KRH37587	Soybean	plastid	10.32	20.69

Protein Annotations

EntrezGene:100808570	MapMan:35.2	EMBL:ACUP02006610	ncoils:Coil	EnsemblPlantsGene:GLYMA_10G191600	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005777	GO:GO:0016020	GO:GO:0016021
UniProt:I1LCG2	EnsemblPlants:KRH34562	ProteinID:KRH34562	ProteinID:KRH34562.1	PFAM:PF02466	PFAM:PF15982
PANTHER:PTHR12459	PANTHER:PTHR12459:SF6	InterPro:TMEM135_N	InterPro:Tmem135	UniParc:UPI000233D64C	SEG:seg

Description

hypothetical protein

Coordinates

chr10:+:42422268..42427524

Molecular Weight (calculated)

58608.2 Da

IEP (calculated)

9.736

GRAVY (calculated)

-0.045

Length

523 amino acids

Sequence
(BLAST)

001: MAPPSSPPLV DNSDSDAEGR LREAEERFRD AIEELQRRQR RAAAHAQQHC RVDSPPCDHG PDESCVAHAI GNLCQTFLLS YGVRVGIGIL LRAFKLVRGQ
101: SYSSLLDLKQ LVSEKDLIVR EEACRIGLLF GGFTGSYHAL RCLLRKLRKK ETPANAILAG LIAGFSIMAL NDSNRRRTLA LYLLARLAQC AYNSAKSKNK
201: FHLWGSHWRH GDSLLFALAC AQVMYAFVMR PESLPKSYQD FIQKTGPVAE PVYKAVRDSC RGHSVDVASL HAYLSRVGKI DYAKLEEFPS IIPCSLIHPV
301: TNSCLAHQGN ATSLTFKKTF PLYFSLTFVP FVVLHLQKFT DAPFRTFWLA IKGAVRSTTF LSAFVGIFQG VICSHRKVFP RDHKLVYWIA GGIAALSVLL
401: EKKARRGELA LYVLPRAVDS LWYILVNRHL LPNIRNAEVF LFSLCMGGIM YYLEHEPETM APFLRGLIRR FLASRISNPS PPSQTASYTY LQALDGITKP
501: ALQEKRDTES SSQKYNLESI PGL

Best Arabidopsis Sequence Match ( AT5G51150.1 )
(BLAST)

001: MPSSFSKPDL DPSSSPPPIS PLSQDSSEAE RRLREAEERL RDAMAELQRR QRSAARGSHA ELCDHADVSC VANAIGNLCQ SFLLSYGVRV GIGILLRAFK
101: LARGQSYSSL LDLKQLVSEK DLIVREEACR IGLLFGGFTG SYHALRCCLR KWRKKETPLN SVLAGSVAGL SILALDDSNQ RRTLALYLLA RLGQAAYNSA
201: KSKNKFHLWG SHWRHGDSLL FSLACAQVMY SFIMRPETLP KSYREFIQKT GPVARPVYQA VRECCRGGPI DVASLSAYIS SKNEASDVKV EEFASIIPCA
301: AIHPNTNSCL AQNANAMSAT FKKTFPLYFS LTFVPYVVLH LQKFMASPYR TSWLAIRDSV RSTSFLSAFV GIFQAFICAH RKVATKDHKL VYWFAGGAAA
401: LSVMLEKKPR RSELALYVLP RAGDSLWEIL VNRHLLPDIK NAEVALFCGC MGGIMYYLEY EPDTMAPFLR GLIRRFLASQ ISNPSSKYPH SSSYSYLQTL
501: DALKKPKTQE SREGETPKAE EKYNLEAIPG L

Arabidopsis Description

Gb [Source:UniProtKB/TrEMBL;Acc:Q9LU59]
SUBAcon: [peroxisome,plastid,nucleus,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.