Factsheet for TraesCS2D01G236700.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
cytosol 1
mitochondrion 1
plasma membrane 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G254400.1	Wheat	plastid	99.27	98.9
TraesCS2A01G226700.1	Wheat	plastid	99.08	98.72
HORVU2Hr1G051560.3	Barley	cytosol, peroxisome	88.44	97.77
Os07t0494900-01	Rice	endoplasmic reticulum	30.28	88.24
Zm00001d000436_P001	Maize	plastid	85.5	84.42
EER97254	Sorghum	plastid	85.69	84.14
GSMUA_Achr8P14960_001	Banana	plasma membrane, plastid	62.39	71.88
VIT_16s0039g02700.t01	Wine grape	plasma membrane	69.54	71.64
Solyc03g093990.2.1	Tomato	plasma membrane	67.16	70.11
PGSC0003DMT400021507	Potato	plasma membrane	67.16	70.11
KRG92233	Soybean	plasma membrane	66.79	70.0
KRH34562	Soybean	plasma membrane	65.87	68.64
AT5G51150.1	Thale cress	nucleus, peroxisome, plasma membrane, plastid	65.14	66.86
CDY05839	Canola	nucleus, peroxisome, plasma membrane	62.94	65.58
CDX71692	Canola	nucleus, peroxisome, plasma membrane	62.94	65.58
Bra029183.1-P	Field mustard	plastid	62.75	64.65
CDY38855	Canola	plastid	62.57	64.46
CDY32637	Canola	plastid	62.57	64.46
KRH71877	Soybean	cytosol	16.33	61.81
Bra035727.1-P	Field mustard	plastid	62.75	55.7
TraesCS4D01G304400.1	Wheat	cytosol, peroxisome, plasma membrane	19.08	21.49

Protein Annotations

EnsemblPlants:TraesCS2D01G236700.1	EnsemblPlantsGene:TraesCS2D01G236700	InterPro:TMEM135_N	InterPro:Tmem135	ncoils:Coil	PANTHER:PTHR12459
PANTHER:PTHR12459:SF6	PFAM:PF02466	PFAM:PF15982	SEG:seg	MapMan:35.2	:

Description

No Description!

Coordinates

chr2D:+:234325734..234330023

Molecular Weight (calculated)

60511.4 Da

IEP (calculated)

9.956

GRAVY (calculated)

-0.056

Length

545 amino acids

Sequence
(BLAST)

001: MPFLSTPSFD LSAGAEPTLG PRPPPPPPPT PPSQPQVSEA AARRLREAEE RLREAIQELH QSHGRDEEAA KGGGWGCCVH QGESCAAHAA GNLCQTFLLS
101: YGVRVGIGIL LRAFKLARRR SYASLLDLKQ LVSEKDLIVR EEACRVGLLF GGFTGSYHAL RCFLRRFRKK ETPFNAILSG SVAGLAILAL DDSSRRRTLS
201: LYLLARLAQC AYNSAKSKNR FHFWGSHWRH GDALLFSVAS AQIMYAFVMR PESLPKSYRD FIQKTGPVAE PVYKAVRDSC RGGHVDLIGL SAYFANKKNS
301: NLINLTRSPS IIPCSVIHPD RASCLAHNVT VTSSTFKKTF PLYFSLTFVP FVVLRLQKFL ESPAATCWRA LVGAVRSTTF LSAFVTLFQS AICLHRKVAS
401: KDHKLVYWFG GLLSGLSILL ENKARRAELA LYVLPRAGES LWYILINRHL LPNIKNAEVG LFCMCMGGIM YFLEYEPDTM APFLRGLIRR FLASKITNPS
501: PPPNRNASYS YLQTLNVLEQ SKTHPTPENG LPTSETYTLE SIPGL

Best Arabidopsis Sequence Match ( AT5G51150.1 )
(BLAST)

001: MPSSFSKPDL DPSSSPPPIS PLSQDSSEAE RRLREAEERL RDAMAELQRR QRSAARGSHA ELCDHADVSC VANAIGNLCQ SFLLSYGVRV GIGILLRAFK
101: LARGQSYSSL LDLKQLVSEK DLIVREEACR IGLLFGGFTG SYHALRCCLR KWRKKETPLN SVLAGSVAGL SILALDDSNQ RRTLALYLLA RLGQAAYNSA
201: KSKNKFHLWG SHWRHGDSLL FSLACAQVMY SFIMRPETLP KSYREFIQKT GPVARPVYQA VRECCRGGPI DVASLSAYIS SKNEASDVKV EEFASIIPCA
301: AIHPNTNSCL AQNANAMSAT FKKTFPLYFS LTFVPYVVLH LQKFMASPYR TSWLAIRDSV RSTSFLSAFV GIFQAFICAH RKVATKDHKL VYWFAGGAAA
401: LSVMLEKKPR RSELALYVLP RAGDSLWEIL VNRHLLPDIK NAEVALFCGC MGGIMYYLEY EPDTMAPFLR GLIRRFLASQ ISNPSSKYPH SSSYSYLQTL
501: DALKKPKTQE SREGETPKAE EKYNLEAIPG L

Arabidopsis Description

Gb [Source:UniProtKB/TrEMBL;Acc:Q9LU59]
SUBAcon: [plastid,nucleus,peroxisome,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.