CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 2
plasma membrane 2
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, mitochondrion, nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	plasma membrane
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH34562	Soybean	plasma membrane	95.96	95.41
KRH71877	Soybean	cytosol	25.0	90.28
VIT_16s0039g02700.t01	Wine grape	plasma membrane	81.15	79.77
PGSC0003DMT400021507	Potato	plasma membrane	77.31	77.01
Solyc03g093990.2.1	Tomato	plasma membrane	77.12	76.82
AT5G51150.1	Thale cress	nucleus, peroxisome, plasma membrane, plastid	75.96	74.39
CDY05839	Canola	nucleus, peroxisome, plasma membrane	74.42	74.0
CDX71692	Canola	nucleus, peroxisome, plasma membrane	74.23	73.81
CDY32637	Canola	plastid	73.08	71.83
CDY38855	Canola	plastid	72.88	71.64
Bra029183.1-P	Field mustard	plastid	72.69	71.46
HORVU2Hr1G051560.3	Barley	cytosol, peroxisome	66.73	70.39
Os07t0494900-01	Rice	endoplasmic reticulum	25.0	69.52
GSMUA_Achr8P14960_001	Banana	plasma membrane, plastid	63.08	69.34
EER97254	Sorghum	plastid	72.88	68.29
Zm00001d000436_P001	Maize	plastid	71.92	67.75
TraesCS2D01G236700.1	Wheat	plastid	70.0	66.79
TraesCS2B01G254400.1	Wheat	plastid	70.19	66.73
TraesCS2A01G226700.1	Wheat	plastid	70.0	66.54
Bra035727.1-P	Field mustard	plastid	74.04	62.7
KRH37587	Soybean	plastid	10.77	21.46
KRH12626	Soybean	cytosol	20.38	21.2

Protein Annotations

EntrezGene:100780457	MapMan:35.2	EMBL:ACUP02012736	ncoils:Coil	EnsemblPlantsGene:GLYMA_20G198600	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005777	GO:GO:0016020	GO:GO:0016021
UniProt:I1NHX9	EnsemblPlants:KRG92233	ProteinID:KRG92233	ProteinID:KRG92233.1	PFAM:PF02466	PFAM:PF15982
PANTHER:PTHR12459	PANTHER:PTHR12459:SF6	InterPro:TMEM135_N	InterPro:Tmem135	UniParc:UPI000233DB98	SEG:seg

Description

hypothetical protein

Coordinates

chr20:-:43631463..43636201

Molecular Weight (calculated)

58482.1 Da

IEP (calculated)

9.921

GRAVY (calculated)

-0.073

Length

520 amino acids

Sequence
(BLAST)

001: MAPPSSPPLV DNSDAERRLR EAEERLRDAI EELQRRQRRA AAHAQQHRHV DSLPCDHGPD ESCVAHAIGN LCQTFLLSYG VRVGIGILLR AFKLVRGQSY
101: SSLLDLKQLV SEKDLIVREE ACRIGLLFGG FTGSYHALRC LLRKLRKKET PANAVLAGSI AGFSIMALND SNRRRTLALY LLARLAQCAY NSAKSKNKFH
201: LWGSHWRHGD SLLFALACAQ VMYAFVMRPE SLPKSYQDFI QKTGPVAEPV YKAVRDSCRG HPVDVASLHA YLSRVGRSDY VKLEEFPSII PCSIIHPATN
301: SCLAHQGNAT SLTFKKTFPL YFSLTFVPFV VLHLQKFTDA PFRTFWLAIK GAVRSTTFLS AFVGIFQGVI CSHRKVFSRD HKLVYWIAGG IAALSVLLEK
401: KARRGELALY VLPRAVDSLW YILVNRHLLP NIRNAEVFLF SLCMGGIMYY LEHEPETMAP FLRGLIRRFL ASRISNPSPP NRTASYTYLQ ALDGITKPTL
501: QEKRDTESSE KYNLESIPGL

Best Arabidopsis Sequence Match ( AT5G51150.1 )
(BLAST)

001: MPSSFSKPDL DPSSSPPPIS PLSQDSSEAE RRLREAEERL RDAMAELQRR QRSAARGSHA ELCDHADVSC VANAIGNLCQ SFLLSYGVRV GIGILLRAFK
101: LARGQSYSSL LDLKQLVSEK DLIVREEACR IGLLFGGFTG SYHALRCCLR KWRKKETPLN SVLAGSVAGL SILALDDSNQ RRTLALYLLA RLGQAAYNSA
201: KSKNKFHLWG SHWRHGDSLL FSLACAQVMY SFIMRPETLP KSYREFIQKT GPVARPVYQA VRECCRGGPI DVASLSAYIS SKNEASDVKV EEFASIIPCA
301: AIHPNTNSCL AQNANAMSAT FKKTFPLYFS LTFVPYVVLH LQKFMASPYR TSWLAIRDSV RSTSFLSAFV GIFQAFICAH RKVATKDHKL VYWFAGGAAA
401: LSVMLEKKPR RSELALYVLP RAGDSLWEIL VNRHLLPDIK NAEVALFCGC MGGIMYYLEY EPDTMAPFLR GLIRRFLASQ ISNPSSKYPH SSSYSYLQTL
501: DALKKPKTQE SREGETPKAE EKYNLEAIPG L

Arabidopsis Description

Gb [Source:UniProtKB/TrEMBL;Acc:Q9LU59]
SUBAcon: [peroxisome,plastid,nucleus,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.