Factsheet for GSMUA_Achr8P14960_001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, plastid

Predictor Summary:

nucleus 2
plastid 4
plasma membrane 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_16s0039g02700.t01	Wine grape	plasma membrane	73.36	65.6
KRH71877	Soybean	cytosol	19.87	65.28
HORVU2Hr1G051560.3	Barley	cytosol, peroxisome	67.65	64.91
Solyc03g093990.2.1	Tomato	plasma membrane	70.4	63.79
PGSC0003DMT400021507	Potato	plasma membrane	70.19	63.6
KRG92233	Soybean	plasma membrane	69.34	63.08
TraesCS2D01G236700.1	Wheat	plastid	71.88	62.39
KRH34562	Soybean	plasma membrane	68.71	62.14
TraesCS2B01G254400.1	Wheat	plastid	71.67	61.97
TraesCS2A01G226700.1	Wheat	plastid	71.67	61.97
Zm00001d000436_P001	Maize	plastid	72.3	61.96
CDY05839	Canola	nucleus, peroxisome, plasma membrane	68.5	61.95
EER97254	Sorghum	plastid	72.52	61.8
CDX71692	Canola	nucleus, peroxisome, plasma membrane	68.29	61.76
AT5G51150.1	Thale cress	nucleus, peroxisome, plasma membrane, plastid	69.13	61.58
CDY32637	Canola	plastid	67.23	60.11
CDY38855	Canola	plastid	67.02	59.92
Bra029183.1-P	Field mustard	plastid	66.81	59.74
Bra035727.1-P	Field mustard	plastid	68.29	52.61
Os07t0494900-01	Rice	endoplasmic reticulum	16.49	41.71
GSMUA_Achr3P01670_001	Banana	cytosol, peroxisome, plastid	21.99	21.89
GSMUA_Achr6P10380_001	Banana	cytosol, mitochondrion, plastid	21.99	20.51

Protein Annotations

EnsemblPlants:GSMUA_Achr8P14960_001	EnsemblPlants:GSMUA_Achr8T14960_001	EnsemblPlantsGene:GSMUA_Achr8G14960_001	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:TMEM135_N	InterPro:Tmem135	ncoils:Coil	PANTHER:PTHR12459	PANTHER:PTHR12459:SF6	PFAM:PF02466
PFAM:PF15982	SEG:seg	UniParc:UPI000294C726	UniProt:M0TQJ9	MapMan:35.2	:

Description

Putative Transmembrane protein 135 [Source:GMGC_GENE;Acc:GSMUA_Achr8G14960_001]

Coordinates

chr8:+:12481219..12496004

Molecular Weight (calculated)

52427.5 Da

IEP (calculated)

9.538

GRAVY (calculated)

0.001

Length

473 amino acids

Sequence
(BLAST)

001: MSLPPSAPSA AAAGPDRLPS PHPGGSVSSE AAERRLREAE ERLREAIEEL QRHHHASRDD SFGDGKPCCD HADESCIAHA IGNLCQSFLL SYGVRVGIGI
101: LLRAFKLARR QSYSSILDLK QLVSEKDLIV REEACRVGLL FGGFTGSYHA LRCFLRKFRK KETQFNAILA GSVAGLSILA LDDPSRRRTL ALYLLARLAQ
201: CAYNSAKSKN KFHLWGSHWR HGDSLLFSLA CAQVMYAFVM RPESLPKSYQ DFIQKTGPVA EPVYKAVREC CRGGPMDLVS LSAYLSNKKE FSSMNLMADP
301: SIVPCSVIHP DTESCLVHNG TAASETFRKT FPLYFSLTFV PFVVLRLQKF LESPAWTSWR AVLGAVRSTS FLSAFVGLFQ AVVCLHRKVA SKDHKLVYWI
401: SGAIAALSVL IEKKARRAEL ALYVLPRAVD SLWYISVNRH FLPHIKNAEH NITGMAGCSF LFVHGGYHVL PGK

Best Arabidopsis Sequence Match ( AT5G51150.1 )
(BLAST)

001: MPSSFSKPDL DPSSSPPPIS PLSQDSSEAE RRLREAEERL RDAMAELQRR QRSAARGSHA ELCDHADVSC VANAIGNLCQ SFLLSYGVRV GIGILLRAFK
101: LARGQSYSSL LDLKQLVSEK DLIVREEACR IGLLFGGFTG SYHALRCCLR KWRKKETPLN SVLAGSVAGL SILALDDSNQ RRTLALYLLA RLGQAAYNSA
201: KSKNKFHLWG SHWRHGDSLL FSLACAQVMY SFIMRPETLP KSYREFIQKT GPVARPVYQA VRECCRGGPI DVASLSAYIS SKNEASDVKV EEFASIIPCA
301: AIHPNTNSCL AQNANAMSAT FKKTFPLYFS LTFVPYVVLH LQKFMASPYR TSWLAIRDSV RSTSFLSAFV GIFQAFICAH RKVATKDHKL VYWFAGGAAA
401: LSVMLEKKPR RSELALYVLP RAGDSLWEIL VNRHLLPDIK NAEVALFCGC MGGIMYYLEY EPDTMAPFLR GLIRRFLASQ ISNPSSKYPH SSSYSYLQTL
501: DALKKPKTQE SREGETPKAE EKYNLEAIPG L

Arabidopsis Description

Gb [Source:UniProtKB/TrEMBL;Acc:Q9LU59]
SUBAcon: [peroxisome,plastid,nucleus,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.