Factsheet for GSMUA_Achr3P01670_001

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, cytosol

Predictor Summary:

plastid 3
cytosol 1
golgi 1
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr6P10380_001	Banana	cytosol, mitochondrion, plastid	79.79	74.75
Zm00001d028006_P001	Maize	plasma membrane	70.11	71.46
Os03t0190900-01	Rice	cytosol	71.79	70.89
EER92718	Sorghum	cytosol, peroxisome, plastid	69.68	70.28
TraesCS4B01G306200.1	Wheat	cytosol, peroxisome, plasma membrane	70.32	69.15
TraesCS4A01G406900.1	Wheat	plasma membrane	69.89	68.88
TraesCS4D01G304400.1	Wheat	cytosol, peroxisome, plasma membrane	70.11	68.8
KRH12626	Soybean	cytosol	66.74	63.4
Bra034434.1-P	Field mustard	cytosol	59.16	62.72
AT1G34630.1	Thale cress	nucleus	63.16	62.37
CDY28404	Canola	cytosol	59.16	61.09
CDX73310	Canola	plastid	61.05	60.8
Bra028061.1-P	Field mustard	cytosol	62.95	60.65
CDY03142	Canola	cytosol, peroxisome, plastid	62.32	60.29
HORVU4Hr1G078610.3	Barley	mitochondrion	69.89	60.04
CDY12034	Canola	cytosol, peroxisome, plastid	61.89	59.51
KRH37587	Soybean	plastid	32.21	58.62
Solyc04g074140.2.1	Tomato	cytosol, nucleus, peroxisome	57.26	55.4
VIT_18s0001g05640.t01	Wine grape	cytosol	66.74	55.03
PGSC0003DMT400016388	Potato	cytosol, nucleus, peroxisome	56.84	54.99
GSMUA_Achr8P14960_001	Banana	plasma membrane, plastid	21.89	21.99

Protein Annotations

EnsemblPlants:GSMUA_Achr3P01670_001	EnsemblPlants:GSMUA_Achr3T01670_001	EnsemblPlantsGene:GSMUA_Achr3G01670_001	InterPro:TMEM135_N	InterPro:Tmem135	PANTHER:PTHR12459
PANTHER:PTHR12459:SF14	PFAM:PF15982	SEG:seg	UniParc:UPI000294C2D4	UniProt:M0SAY5	MapMan:35.2

Description

expressed protein [Source:GMGC_GENE;Acc:GSMUA_Achr3G01670_001]

Coordinates

chr3:+:1120995..1128428

Molecular Weight (calculated)

52743.8 Da

IEP (calculated)

10.072

GRAVY (calculated)

0.136

Length

475 amino acids

Sequence
(BLAST)

001: MSRTAYDEGV APANVQLANG EHARRTREGG CWRSDPPGLR RVPEEWRWLR RCLEAAAKGF AIGAGLKGGL ALFSVLVRLR SRRSLRSSAR KAGVFTNKEA
101: VVVALEETLR YGIFLGTLAG TYVSVDEVIA ALGGHKRTAR WRSLLAGLIA GPSMLLTGPN KQHTSLAIYI LMRAAVLASR CGIKSKLFGG VCRPLTWSHG
201: DIFLMCLASS QILPAYILKQ DSLPSSYKSF LHKHGGKDAV ILQSMREIAS NICFSNLDGV KKYYKSIGVD VKLDPNMNVP CSIVHGNQSC FEHFITFLFQ
301: EYGRALPVYL PVYLVPALVV HRQGLWKRPY TILGKSLLGT ARSSLFLSVY CASAWAWTCL LFRLFKRCNI PMVVIGTFPT GLALLIEKKS RRTEISLYCL
401: ARAIESFCTC LADAGVFPQA SKLKRADVIV FSFATAIIMH CYAQEREVFR SKYLNVLDWV FGVPPPYDDE HCKKS

Best Arabidopsis Sequence Match ( AT1G34630.1 )
(BLAST)

001: MSPSDESTNG SRCSSCISSD NDGNDFGKSD EFTCKQCKNS DSKSKSKSVN DSDKLRRIIV ASVKGFTIGT GLKGGLAIFS IVARFARRRR SSPQSRKTGE
101: FSNSEAIAMG IKETLRYGLF LGTFAGTFVS VDEAIAALAG DKRTAKWRAL FAGLVAGPSM LLTGPNTQHT SLAVYILMRA AVLASRCGIK SKRFGTICKP
201: LTWKHGDLFL MCLSSSQILS AYILKQESLP SSYKSFLNKQ GGKDLSILQG VKDIATAQPF TNLRAIEKYY KSVGVDIKLD PTMKVPCTII HGNESCVKHG
301: VTFFLQAYKR ALPVYVPVYL IPALIVHRQD LLKKQYSILG KGLLGTARSS LFLATYCSSA WAWTCLLFRT FETCNIPLVA IATFPTGLAL AIEKKSRRIE
401: ISLYCLARAI ESFFTCMTEA GYIRPPKSLR RADVVVFSVS TAIIMHCYAQ ERDVFRSKYL NVLDWVFGVP PPPPAPSCET T

Arabidopsis Description

At1g34630/F12K21.3 [Source:UniProtKB/TrEMBL;Acc:Q8VZG0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.