Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 2
- peroxisome 1
- golgi 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY03142 | Canola | cytosol, peroxisome, plastid | 96.15 | 96.54 |
| Bra034434.1-P | Field mustard | cytosol | 77.28 | 85.04 |
| AT1G34630.1 | Thale cress | nucleus | 78.7 | 80.67 |
| EER92718 | Sorghum | cytosol, peroxisome, plastid | 63.08 | 66.03 |
| KRH12626 | Soybean | cytosol | 66.13 | 65.2 |
| Os03t0190900-01 | Rice | cytosol | 62.07 | 63.62 |
| GSMUA_Achr3P01670_001 | Banana | cytosol, peroxisome, plastid | 60.65 | 62.95 |
| TraesCS4B01G306200.1 | Wheat | cytosol, peroxisome, plasma membrane | 61.05 | 62.32 |
| TraesCS4A01G406900.1 | Wheat | plasma membrane | 60.85 | 62.24 |
| TraesCS4D01G304400.1 | Wheat | cytosol, peroxisome, plasma membrane | 60.65 | 61.78 |
| KRH37587 | Soybean | plastid | 32.66 | 61.69 |
| GSMUA_Achr6P10380_001 | Banana | cytosol, mitochondrion, plastid | 63.08 | 61.34 |
| VIT_18s0001g05640.t01 | Wine grape | cytosol | 67.34 | 57.64 |
| PGSC0003DMT400016388 | Potato | cytosol, nucleus, peroxisome | 55.38 | 55.6 |
| Solyc04g074140.2.1 | Tomato | cytosol, nucleus, peroxisome | 55.38 | 55.6 |
| HORVU4Hr1G078610.3 | Barley | mitochondrion | 62.27 | 55.52 |
| Zm00001d027280_P001 | Maize | cytosol, plasma membrane, plastid | 10.14 | 39.37 |
| Bra029183.1-P | Field mustard | plastid | 19.07 | 17.77 |
| Bra035727.1-P | Field mustard | plastid | 19.88 | 15.96 |
Protein Annotations
Description
AT1G34630 (E=3e-212) | unknown protein
Coordinates
chrA09:-:18838081..18840341
Molecular Weight (calculated)
54295.3 Da
IEP (calculated)
10.013
GRAVY (calculated)
0.060
Length
493 amino acids
Sequence
(BLAST)
(BLAST)
001: MSPSRRKANG SRCSCTRGEI DGISGGESFD RTCTHCNGSD SIKPDPASSW FLSSLSETKL DDSEKLRRII VASLKGFSVG TGIKGGLALF SIVVRFARRR
101: SSSKSRRTGD FSNSEAISMG IKETLRYGLF LGTFAGTFVS VDEAICSLVG HQRQTAKWRA LFAGLVAGPS MLLTGPNTTH TSLAVYILMR AAVLASRCGI
201: KSKRFGSICK PLTWEHGDLF LMCLSSSQIL SAYILKQESL PSSYKSFLNK HGGKDLSILQ GIKDLASAKP FTNLRAIEKH YKSVGVDIKL DPNMRIPCSM
301: IHGGESCTKH GLTFFLQAYM RALPVYVPVY LIPALIVHRQ DLLKKQYSIL GKGLFGTARS SLFLSTYCTS AWVWTCLLFR TLDTCNIPLV AIATFPTGLA
401: LAIEKKSRRI EISLYCLARA IESFFTSMTE AGYIRPPKIL RRADVVVFSV STAIIMHCYA QEREVFRSKY LNVLDWVFGV PPPPPPPLPS EET
101: SSSKSRRTGD FSNSEAISMG IKETLRYGLF LGTFAGTFVS VDEAICSLVG HQRQTAKWRA LFAGLVAGPS MLLTGPNTTH TSLAVYILMR AAVLASRCGI
201: KSKRFGSICK PLTWEHGDLF LMCLSSSQIL SAYILKQESL PSSYKSFLNK HGGKDLSILQ GIKDLASAKP FTNLRAIEKH YKSVGVDIKL DPNMRIPCSM
301: IHGGESCTKH GLTFFLQAYM RALPVYVPVY LIPALIVHRQ DLLKKQYSIL GKGLFGTARS SLFLSTYCTS AWVWTCLLFR TLDTCNIPLV AIATFPTGLA
401: LAIEKKSRRI EISLYCLARA IESFFTSMTE AGYIRPPKIL RRADVVVFSV STAIIMHCYA QEREVFRSKY LNVLDWVFGV PPPPPPPLPS EET
001: MSPSDESTNG SRCSSCISSD NDGNDFGKSD EFTCKQCKNS DSKSKSKSVN DSDKLRRIIV ASVKGFTIGT GLKGGLAIFS IVARFARRRR SSPQSRKTGE
101: FSNSEAIAMG IKETLRYGLF LGTFAGTFVS VDEAIAALAG DKRTAKWRAL FAGLVAGPSM LLTGPNTQHT SLAVYILMRA AVLASRCGIK SKRFGTICKP
201: LTWKHGDLFL MCLSSSQILS AYILKQESLP SSYKSFLNKQ GGKDLSILQG VKDIATAQPF TNLRAIEKYY KSVGVDIKLD PTMKVPCTII HGNESCVKHG
301: VTFFLQAYKR ALPVYVPVYL IPALIVHRQD LLKKQYSILG KGLLGTARSS LFLATYCSSA WAWTCLLFRT FETCNIPLVA IATFPTGLAL AIEKKSRRIE
401: ISLYCLARAI ESFFTCMTEA GYIRPPKSLR RADVVVFSVS TAIIMHCYAQ ERDVFRSKYL NVLDWVFGVP PPPPAPSCET T
101: FSNSEAIAMG IKETLRYGLF LGTFAGTFVS VDEAIAALAG DKRTAKWRAL FAGLVAGPSM LLTGPNTQHT SLAVYILMRA AVLASRCGIK SKRFGTICKP
201: LTWKHGDLFL MCLSSSQILS AYILKQESLP SSYKSFLNKQ GGKDLSILQG VKDIATAQPF TNLRAIEKYY KSVGVDIKLD PTMKVPCTII HGNESCVKHG
301: VTFFLQAYKR ALPVYVPVYL IPALIVHRQD LLKKQYSILG KGLLGTARSS LFLATYCSSA WAWTCLLFRT FETCNIPLVA IATFPTGLAL AIEKKSRRIE
401: ISLYCLARAI ESFFTCMTEA GYIRPPKSLR RADVVVFSVS TAIIMHCYAQ ERDVFRSKYL NVLDWVFGVP PPPPAPSCET T
Arabidopsis Description
At1g34630/F12K21.3 [Source:UniProtKB/TrEMBL;Acc:Q8VZG0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.