Factsheet for Solyc04g074140.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, nucleus, peroxisome

Predictor Summary:

plastid 1
cytosol 1
peroxisome 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400016388	Potato	cytosol, nucleus, peroxisome	98.57	98.57
KRH37587	Soybean	plastid	33.4	62.84
KRH12626	Soybean	cytosol	60.29	59.2
AT1G34630.1	Thale cress	nucleus	57.23	58.42
GSMUA_Achr3P01670_001	Banana	cytosol, peroxisome, plastid	55.4	57.26
Bra034434.1-P	Field mustard	cytosol	52.14	57.14
EER92718	Sorghum	cytosol, peroxisome, plastid	54.38	56.69
TraesCS4A01G406900.1	Wheat	plasma membrane	54.99	56.02
CDY03142	Canola	cytosol, peroxisome, plastid	56.01	56.01
CDX73310	Canola	plastid	54.38	55.97
TraesCS4B01G306200.1	Wheat	cytosol, peroxisome, plasma membrane	54.58	55.49
CDY28404	Canola	cytosol	51.93	55.43
GSMUA_Achr6P10380_001	Banana	cytosol, mitochondrion, plastid	57.23	55.42
Bra028061.1-P	Field mustard	cytosol	55.6	55.38
TraesCS4D01G304400.1	Wheat	cytosol, peroxisome, plasma membrane	54.58	55.37
Os03t0190900-01	Rice	cytosol	53.77	54.89
CDY12034	Canola	cytosol, peroxisome, plastid	55.19	54.86
VIT_18s0001g05640.t01	Wine grape	cytosol	63.34	53.99
HORVU4Hr1G078610.3	Barley	mitochondrion	54.79	48.64
Zm00001d027280_P001	Maize	cytosol, plasma membrane, plastid	10.39	40.16
Solyc03g093990.2.1	Tomato	plasma membrane	21.18	19.92

Protein Annotations

EnsemblPlants:Solyc04g074140.2.1	EnsemblPlantsGene:Solyc04g074140.2	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005777	InterPro:Tmem135	PANTHER:PTHR12459	PANTHER:PTHR12459:SF14	SEG:seg	UniParc:UPI0002767393
UniProt:K4BTV2	MapMan:35.2	:	:	:	:

Description

No Description!

Coordinates

chr4:+:60141479..60147151

Molecular Weight (calculated)

54109.6 Da

IEP (calculated)

10.108

GRAVY (calculated)

0.160

Length

491 amino acids

Sequence
(BLAST)

001: MPLSGDGADV SAGGRCTCSS LDEESLIQNC QHCRRSTLPS SSSSCSLLSL ESYPVQDYDK LWRIFSASVK GFTIGAGLKG GLAIFAVLSR LRRRKSMSSA
101: KKGQMVSSRD DVVLALKETL RYGLFLGTFS GTFVSVDEIV SAWGGHRRTA KWRALLAGAI AGPSLLLTGN TQHTSLAVYI LVRAAVLASR CGIKSKRFGR
201: ICKPLTWAHG DIFLMCLSSS QILSAYILKQ DSLHPSYKSF LNKHGGKALV ILQGVKDLAC GNSVMNLEAI ENHYKSNGIN IKLDPQMKVP CSIVHENQGC
301: GAHFISFLIQ AYKRALPVYL PVYLVPALIV HRQGILKRPN TILAKGLLGT ARSSLFLSMY CSSAWLWTCF LFRLFKRCNI PMVALGTFPT GLALAIEKKS
401: RRIEISLYCL ARALESFVTC MADVGYLPQS EKLKRGDVVI FSMATAIIMH CYAMERDVFK SKYLNVLDWV FGVPLPPYDT TPRKKWRSSS I

Best Arabidopsis Sequence Match ( AT1G34630.1 )
(BLAST)

001: MSPSDESTNG SRCSSCISSD NDGNDFGKSD EFTCKQCKNS DSKSKSKSVN DSDKLRRIIV ASVKGFTIGT GLKGGLAIFS IVARFARRRR SSPQSRKTGE
101: FSNSEAIAMG IKETLRYGLF LGTFAGTFVS VDEAIAALAG DKRTAKWRAL FAGLVAGPSM LLTGPNTQHT SLAVYILMRA AVLASRCGIK SKRFGTICKP
201: LTWKHGDLFL MCLSSSQILS AYILKQESLP SSYKSFLNKQ GGKDLSILQG VKDIATAQPF TNLRAIEKYY KSVGVDIKLD PTMKVPCTII HGNESCVKHG
301: VTFFLQAYKR ALPVYVPVYL IPALIVHRQD LLKKQYSILG KGLLGTARSS LFLATYCSSA WAWTCLLFRT FETCNIPLVA IATFPTGLAL AIEKKSRRIE
401: ISLYCLARAI ESFFTCMTEA GYIRPPKSLR RADVVVFSVS TAIIMHCYAQ ERDVFRSKYL NVLDWVFGVP PPPPAPSCET T

Arabidopsis Description

At1g34630/F12K21.3 [Source:UniProtKB/TrEMBL;Acc:Q8VZG0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.