Factsheet for TraesCS4A01G406900.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 1
mitochondrion 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, plasma membrane
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4B01G306200.1	Wheat	cytosol, peroxisome, plasma membrane	95.85	95.65
TraesCS4D01G304400.1	Wheat	cytosol, peroxisome, plasma membrane	95.64	95.25
Zm00001d028006_P001	Maize	plasma membrane	79.46	82.19
EER92718	Sorghum	cytosol, peroxisome, plastid	79.46	81.32
Os03t0190900-01	Rice	cytosol	80.5	80.67
HORVU4Hr1G078610.3	Barley	mitochondrion	89.42	77.94
GSMUA_Achr3P01670_001	Banana	cytosol, peroxisome, plastid	68.88	69.89
GSMUA_Achr6P10380_001	Banana	cytosol, mitochondrion, plastid	70.33	66.86
Bra034434.1-P	Field mustard	cytosol	59.54	64.06
AT1G34630.1	Thale cress	nucleus	63.9	64.03
CDY28404	Canola	cytosol	59.54	62.39
CDX73310	Canola	plastid	61.41	62.05
KRH12626	Soybean	cytosol	63.49	61.2
CDY03142	Canola	cytosol, peroxisome, plastid	62.24	61.1
CDY12034	Canola	cytosol, peroxisome, plastid	62.45	60.93
Bra028061.1-P	Field mustard	cytosol	62.24	60.85
KRH37587	Soybean	plastid	30.91	57.09
PGSC0003DMT400016388	Potato	cytosol, nucleus, peroxisome	56.22	55.19
Solyc04g074140.2.1	Tomato	cytosol, nucleus, peroxisome	56.02	54.99
VIT_18s0001g05640.t01	Wine grape	cytosol	64.11	53.65
TraesCS2A01G226700.1	Wheat	plastid	22.41	19.74

Protein Annotations

EnsemblPlants:TraesCS4A01G406900.1	EnsemblPlantsGene:TraesCS4A01G406900	InterPro:TMEM135_N	InterPro:Tmem135	PANTHER:PTHR12459	PANTHER:PTHR12459:SF14
PFAM:PF15982	SEG:seg	MapMan:35.2	:	:	:

Description

No Description!

Coordinates

chr4A:-:679974372..679979140

Molecular Weight (calculated)

52985.2 Da

IEP (calculated)

9.847

GRAVY (calculated)

0.159

Length

482 amino acids

Sequence
(BLAST)

001: MAPAAPEELH CAPAPDKPPP LAPQGELRWL RRCAGQGDDL RWLRRCVGAA TKGFAIGAGL KGGLALFSVL VRLRSRRSPR SRKAGAMTND EAALLALKET
101: VRYGMFLGTF AGAFVSVDEC IAALWGRKRT ARWRSLLSGL IAGPSMLLTG PGTQHTSLAI YILMRAAVLA SRCGIKSRRF GKICKPLTWS HGDIFLMCLS
201: SAQILSAYIL QQDSLPSSYK SFLKTHGGKD QSILQGLKEV VNHTAFSNLE AIEKYYKSVG VDIKLDPDMK VPCSIVHGNQ SCAGHFISFL LQAYGRAVPV
301: YIPVYLVPAL VVHRQDLMKR PYTIMGKSLL GTARSSLFLS MYCASAWAWT CFLFRTFEKC STPLVVLGTF PAGLALFIEK KSRRIEISLY CLARAIESFF
401: TCMTDAGLCP PILQIKRADV VVFSMATSII MHCYAQEREV FRSKYLNVLD WVFGVPLPSE DNDSKCHSTS SDGIKKGIFS IG

Best Arabidopsis Sequence Match ( AT1G34630.1 )
(BLAST)

001: MSPSDESTNG SRCSSCISSD NDGNDFGKSD EFTCKQCKNS DSKSKSKSVN DSDKLRRIIV ASVKGFTIGT GLKGGLAIFS IVARFARRRR SSPQSRKTGE
101: FSNSEAIAMG IKETLRYGLF LGTFAGTFVS VDEAIAALAG DKRTAKWRAL FAGLVAGPSM LLTGPNTQHT SLAVYILMRA AVLASRCGIK SKRFGTICKP
201: LTWKHGDLFL MCLSSSQILS AYILKQESLP SSYKSFLNKQ GGKDLSILQG VKDIATAQPF TNLRAIEKYY KSVGVDIKLD PTMKVPCTII HGNESCVKHG
301: VTFFLQAYKR ALPVYVPVYL IPALIVHRQD LLKKQYSILG KGLLGTARSS LFLATYCSSA WAWTCLLFRT FETCNIPLVA IATFPTGLAL AIEKKSRRIE
401: ISLYCLARAI ESFFTCMTEA GYIRPPKSLR RADVVVFSVS TAIIMHCYAQ ERDVFRSKYL NVLDWVFGVP PPPPAPSCET T

Arabidopsis Description

At1g34630/F12K21.3 [Source:UniProtKB/TrEMBL;Acc:Q8VZG0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.