Factsheet for Bra034434.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 2
peroxisome 1
plastid 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY28404	Canola	cytosol	99.33	96.74
Bra028061.1-P	Field mustard	cytosol	85.04	77.28
AT1G34630.1	Thale cress	nucleus	81.92	76.3
KRH12626	Soybean	cytosol	70.09	62.8
EER92718	Sorghum	cytosol, peroxisome, plastid	65.4	62.21
Os03t0190900-01	Rice	cytosol	64.51	60.08
TraesCS4B01G306200.1	Wheat	cytosol, peroxisome, plasma membrane	64.29	59.63
TraesCS4A01G406900.1	Wheat	plasma membrane	64.06	59.54
TraesCS4D01G304400.1	Wheat	cytosol, peroxisome, plasma membrane	64.06	59.3
GSMUA_Achr3P01670_001	Banana	cytosol, peroxisome, plastid	62.72	59.16
GSMUA_Achr6P10380_001	Banana	cytosol, mitochondrion, plastid	66.07	58.38
KRH37587	Soybean	plastid	33.26	57.09
VIT_18s0001g05640.t01	Wine grape	cytosol	70.98	55.21
PGSC0003DMT400016388	Potato	cytosol, nucleus, peroxisome	57.14	52.14
Solyc04g074140.2.1	Tomato	cytosol, nucleus, peroxisome	57.14	52.14
HORVU4Hr1G078610.3	Barley	mitochondrion	64.29	52.08
Zm00001d027280_P001	Maize	cytosol, plasma membrane, plastid	9.15	32.28
Bra029183.1-P	Field mustard	plastid	20.31	17.2
Bra035727.1-P	Field mustard	plastid	21.65	15.8

Protein Annotations

EnsemblPlants:Bra034434.1	EnsemblPlants:Bra034434.1-P	EnsemblPlantsGene:Bra034434	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:TMEM135_N	InterPro:Tmem135	PANTHER:PTHR12459	PANTHER:PTHR12459:SF14	PFAM:PF15982	SEG:seg
TMHMM:TMhelix	UniParc:UPI0002548041	UniProt:M4F041	MapMan:35.2	:	:

Description

AT1G34630 (E=4e-168) | unknown protein

Coordinates

chrA05:-:13953591..13955735

Molecular Weight (calculated)

49265.3 Da

IEP (calculated)

9.865

GRAVY (calculated)

0.095

Length

448 amino acids

Sequence
(BLAST)

001: MSPSRETENG SRCSCVIDGV AGDDSGESFD LTCNHCNGSN SIKPDLSSSC SPSGSKSEKL RRITVASIKA FSIGTGIKGG LAIFSIFARL ARRRSRRTGD
101: FSNSEAIAMG IKETLRYGLF LGTFAVAGPS MLLTGPNTQH TSLAVYILMR AAVLASRCGI KSKRFGSFCK PLTWKHGDLF LMCLSSSQIL SSYILKQDSL
201: PSSYKSFLNK QGGKDLSIIQ GVKDIASAKP FTNLRAIEKY YKSVGVDIKL DPNMKVPCSI IHGKESCTKH ALTFFLQAYK RALPVYVPVY LIPALIVHRQ
301: DLLKKQYSIL GKGLLGTARS SLFLSTYCTS SWAWTCLLFR IFETCSIPIV AIATFPTGLA LAIEKKSRRI EISLYCLARA IESFFTCMTD AGYIRPPKIL
401: RRADVVVFSV STAIIMHCYA QEREVFRSKY LNVLDWVCGV PPPPCEKT

Best Arabidopsis Sequence Match ( AT1G34630.1 )
(BLAST)

001: MSPSDESTNG SRCSSCISSD NDGNDFGKSD EFTCKQCKNS DSKSKSKSVN DSDKLRRIIV ASVKGFTIGT GLKGGLAIFS IVARFARRRR SSPQSRKTGE
101: FSNSEAIAMG IKETLRYGLF LGTFAGTFVS VDEAIAALAG DKRTAKWRAL FAGLVAGPSM LLTGPNTQHT SLAVYILMRA AVLASRCGIK SKRFGTICKP
201: LTWKHGDLFL MCLSSSQILS AYILKQESLP SSYKSFLNKQ GGKDLSILQG VKDIATAQPF TNLRAIEKYY KSVGVDIKLD PTMKVPCTII HGNESCVKHG
301: VTFFLQAYKR ALPVYVPVYL IPALIVHRQD LLKKQYSILG KGLLGTARSS LFLATYCSSA WAWTCLLFRT FETCNIPLVA IATFPTGLAL AIEKKSRRIE
401: ISLYCLARAI ESFFTCMTEA GYIRPPKSLR RADVVVFSVS TAIIMHCYAQ ERDVFRSKYL NVLDWVFGVP PPPPAPSCET T

Arabidopsis Description

At1g34630/F12K21.3 [Source:UniProtKB/TrEMBL;Acc:Q8VZG0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.