Factsheet for GSMUA_Achr6P10380_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid, cytosol

Predictor Summary:

plastid 3
mitochondrion 4
peroxisome 1
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr3P01670_001	Banana	cytosol, peroxisome, plastid	74.75	79.79
Zm00001d028006_P001	Maize	plasma membrane	67.26	73.18
Os03t0190900-01	Rice	cytosol	68.24	71.93
EER92718	Sorghum	cytosol, peroxisome, plastid	66.67	71.76
TraesCS4A01G406900.1	Wheat	plasma membrane	66.86	70.33
TraesCS4B01G306200.1	Wheat	cytosol, peroxisome, plasma membrane	66.86	70.19
TraesCS4D01G304400.1	Wheat	cytosol, peroxisome, plasma membrane	66.27	69.42
KRH12626	Soybean	cytosol	65.68	66.6
Bra034434.1-P	Field mustard	cytosol	58.38	66.07
AT1G34630.1	Thale cress	nucleus	61.93	65.28
CDY28404	Canola	cytosol	58.58	64.57
CDX73310	Canola	plastid	60.35	64.15
Bra028061.1-P	Field mustard	cytosol	61.34	63.08
CDY12034	Canola	cytosol, peroxisome, plastid	61.14	62.75
CDY03142	Canola	cytosol, peroxisome, plastid	60.75	62.73
KRH37587	Soybean	plastid	31.76	61.69
HORVU4Hr1G078610.3	Barley	mitochondrion	67.06	61.48
VIT_18s0001g05640.t01	Wine grape	cytosol	65.88	57.99
Solyc04g074140.2.1	Tomato	cytosol, nucleus, peroxisome	55.42	57.23
PGSC0003DMT400016388	Potato	cytosol, nucleus, peroxisome	55.03	56.82
GSMUA_Achr8P14960_001	Banana	plasma membrane, plastid	20.51	21.99

Protein Annotations

EnsemblPlants:GSMUA_Achr6P10380_001	EnsemblPlants:GSMUA_Achr6T10380_001	EnsemblPlantsGene:GSMUA_Achr6G10380_001	InterPro:TMEM135_N	InterPro:Tmem135	PANTHER:PTHR12459
PANTHER:PTHR12459:SF14	PFAM:PF15982	SEG:seg	UniParc:UPI000294A88C	UniProt:M0T5T7	MapMan:35.2

Description

expressed protein [Source:GMGC_GENE;Acc:GSMUA_Achr6G10380_001]

Coordinates

chr6:-:6934124..6945633

Molecular Weight (calculated)

55115.7 Da

IEP (calculated)

10.327

GRAVY (calculated)

0.147

Length

507 amino acids

Sequence
(BLAST)

001: MSRPRSDGGM GVATGGPSLA NGILANGDSG HRTCESDFRG LDRPGVAGAA AAPLPPPPPP PSPSTLPAGI RRAPDEERRR LRRCVEAATK GFAIGAGLKG
101: GLALFSVLVR LKSRRSLRPS ARKAGVFTNE EAVVLALKET LRYGLFLGTF AGAYVSVDEV IAAFGGHRRT AGWRSLIAGL IAGPSMLLTG PNTQHTSLAI
201: YILMRAAVLA SRCGIKSERF GGLCRPLTWL HGDIFLMCLS SSQILSAYIL KQDSLPSSYK SFLNKHGGKD AVILQGVKEI ASSIPFSNLD KIEKYYKSIS
301: VDVKLDPNMK VPCSIVHGNQ SCSRHFITFL FQEYGRAIPV YLPVYLVPAL IVHRQGLLKR PYTILGKSLL GTARSSLFLS VYCASAWAWT CLLFRILKRC
401: NIPMVAIGTF PTGLALLIEK KTRRIEISLY CLARAIESFF TCLADAGLLP QASKFKRADV AVFSLATAII MHCYAQEREV FRSKYLNVLD WVFGVPLSPD
501: NEHVKKS

Best Arabidopsis Sequence Match ( AT1G34630.1 )
(BLAST)

001: MSPSDESTNG SRCSSCISSD NDGNDFGKSD EFTCKQCKNS DSKSKSKSVN DSDKLRRIIV ASVKGFTIGT GLKGGLAIFS IVARFARRRR SSPQSRKTGE
101: FSNSEAIAMG IKETLRYGLF LGTFAGTFVS VDEAIAALAG DKRTAKWRAL FAGLVAGPSM LLTGPNTQHT SLAVYILMRA AVLASRCGIK SKRFGTICKP
201: LTWKHGDLFL MCLSSSQILS AYILKQESLP SSYKSFLNKQ GGKDLSILQG VKDIATAQPF TNLRAIEKYY KSVGVDIKLD PTMKVPCTII HGNESCVKHG
301: VTFFLQAYKR ALPVYVPVYL IPALIVHRQD LLKKQYSILG KGLLGTARSS LFLATYCSSA WAWTCLLFRT FETCNIPLVA IATFPTGLAL AIEKKSRRIE
401: ISLYCLARAI ESFFTCMTEA GYIRPPKSLR RADVVVFSVS TAIIMHCYAQ ERDVFRSKYL NVLDWVFGVP PPPPAPSCET T

Arabidopsis Description

At1g34630/F12K21.3 [Source:UniProtKB/TrEMBL;Acc:Q8VZG0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.