CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, peroxisome, plastid

Predictor Summary:

plastid 2
cytosol 1
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plastid
Any Predictor:	cytosol, peroxisome, plastid
BaCelLo:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY03142	Canola	cytosol, peroxisome, plastid	90.49	91.04
CDX73310	Canola	plastid	78.34	81.13
AT1G34630.1	Thale cress	nucleus	78.95	81.08
CDY28404	Canola	cytosol	74.09	79.57
EER92718	Sorghum	cytosol, peroxisome, plastid	62.55	65.61
KRH12626	Soybean	cytosol	66.19	65.4
Os03t0190900-01	Rice	cytosol	61.94	63.62
TraesCS4B01G306200.1	Wheat	cytosol, peroxisome, plasma membrane	61.13	62.53
TraesCS4A01G406900.1	Wheat	plasma membrane	60.93	62.45
TraesCS4D01G304400.1	Wheat	cytosol, peroxisome, plasma membrane	60.73	61.98
GSMUA_Achr3P01670_001	Banana	cytosol, peroxisome, plastid	59.51	61.89
GSMUA_Achr6P10380_001	Banana	cytosol, mitochondrion, plastid	62.75	61.14
KRH37587	Soybean	plastid	32.19	60.92
VIT_18s0001g05640.t01	Wine grape	cytosol	67.61	57.99
PGSC0003DMT400016388	Potato	cytosol, nucleus, peroxisome	54.86	55.19
Solyc04g074140.2.1	Tomato	cytosol, nucleus, peroxisome	54.86	55.19
HORVU4Hr1G078610.3	Barley	mitochondrion	61.54	54.97
Zm00001d027280_P001	Maize	cytosol, plasma membrane, plastid	9.92	38.58
CDY05839	Canola	nucleus, peroxisome, plasma membrane	20.45	19.31
CDX71692	Canola	nucleus, peroxisome, plasma membrane	20.45	19.31
CDY38855	Canola	plastid	19.64	18.34
CDY32637	Canola	plastid	19.64	18.34

Protein Annotations

EnsemblPlants:CDY12034	EnsemblPlantsGene:GSBRNA2T00060972001	InterPro:TMEM135_N	InterPro:Tmem135	PANTHER:PTHR12459	PANTHER:PTHR12459:SF14
PFAM:PF15982	ProteinID:CDY12034	ProteinID:CDY12034.1	SEG:seg	UniParc:UPI0004EDB6A7	UniProt:A0A078FGD3
MapMan:35.2	:	:	:	:	:

Description

BnaAnng02190DBnaAnng02190D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FGD3]

Coordinates

chrLK032016:-:769610..772015

Molecular Weight (calculated)

54550.8 Da

IEP (calculated)

9.951

GRAVY (calculated)

0.086

Length

494 amino acids

Sequence
(BLAST)

001: MWPSRRKANG SRCSCTRGEI DGISGGESFD RTCTHCNGSD SIKPDPASSW FLSSLSETKL DDSEKLRRII VASLKGFSVG TGIKGGLALF SIIVRFARRR
101: SSSKSRRTGD FSNSEAISMG IKETLRYGLF LGTFAGTFVS VDEAICSLCF CLKPRTAKWR ALFAGLVAGP SMLLTGPNTT HTSLAVYILM RAAVLASRCG
201: IKSKRFGSIC KPLTWEHGDL FLMCLSSSQI LSAYILKQES LPSSYKSFLN KHGGKDLSIL QGIKDLASAK PFTNLRAIEK HYKSVGVDIK LDPNMRIPCS
301: MIHGGESCTK HGLTFFLQAY MRALPVYVPV YLIPALIVHR QDLLKKQYSI LGKGLFGTAR SSLFLSTYCT SAWVWTCLLF RTLDTCNIPL VAIATFPTGL
401: ALAIEKKSRR IEISLYCLAR AIESFFTSMT EAGYIRPPKI LRRADVVVFS VSTAIIMHCY AQEREVFRSK YLNVLDWVFG VPPPPPPPLP SEET

Best Arabidopsis Sequence Match ( AT1G34630.1 )
(BLAST)

001: MSPSDESTNG SRCSSCISSD NDGNDFGKSD EFTCKQCKNS DSKSKSKSVN DSDKLRRIIV ASVKGFTIGT GLKGGLAIFS IVARFARRRR SSPQSRKTGE
101: FSNSEAIAMG IKETLRYGLF LGTFAGTFVS VDEAIAALAG DKRTAKWRAL FAGLVAGPSM LLTGPNTQHT SLAVYILMRA AVLASRCGIK SKRFGTICKP
201: LTWKHGDLFL MCLSSSQILS AYILKQESLP SSYKSFLNKQ GGKDLSILQG VKDIATAQPF TNLRAIEKYY KSVGVDIKLD PTMKVPCTII HGNESCVKHG
301: VTFFLQAYKR ALPVYVPVYL IPALIVHRQD LLKKQYSILG KGLLGTARSS LFLATYCSSA WAWTCLLFRT FETCNIPLVA IATFPTGLAL AIEKKSRRIE
401: ISLYCLARAI ESFFTCMTEA GYIRPPKSLR RADVVVFSVS TAIIMHCYAQ ERDVFRSKYL NVLDWVFGVP PPPPAPSCET T

Arabidopsis Description

At1g34630/F12K21.3 [Source:UniProtKB/TrEMBL;Acc:Q8VZG0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.