Factsheet for Zm00001d027280_P001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, plastid, cytosol

Predictor Summary:

cytosol 1
mitochondrion 1
plastid 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plasma membrane, plastid
Any Predictor:	cytosol, mitochondrion, plasma membrane
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d028006_P001	Maize	plasma membrane	68.5	18.67
KRH37587	Soybean	plastid	29.13	14.18
AT1G34630.1	Thale cress	nucleus	40.16	10.6
PGSC0003DMT400016388	Potato	cytosol, nucleus, peroxisome	40.16	10.39
Solyc04g074140.2.1	Tomato	cytosol, nucleus, peroxisome	40.16	10.39
CDY03142	Canola	cytosol, peroxisome, plastid	39.37	10.18
Bra028061.1-P	Field mustard	cytosol	39.37	10.14
CDY12034	Canola	cytosol, peroxisome, plastid	38.58	9.92
KRH12626	Soybean	cytosol	38.58	9.8
VIT_18s0001g05640.t01	Wine grape	cytosol	44.09	9.72
Bra034434.1-P	Field mustard	cytosol	32.28	9.15
CDX73310	Canola	plastid	33.86	9.01
CDY28404	Canola	cytosol	32.28	8.91
Zm00001d032062_P001	Maize	mitochondrion	15.75	5.19
Zm00001d000436_P001	Maize	plastid	15.75	3.62
Zm00001d047018_P004	Maize	extracellular	2.36	2.31

Protein Annotations

EnsemblPlants:Zm00001d027280_P001	EnsemblPlants:Zm00001d027280_T001	EnsemblPlantsGene:Zm00001d027280	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:Tmem135	PANTHER:PTHR12459	PANTHER:PTHR12459:SF14	ProteinID:ONL92596.1	SEG:seg	TMHMM:TMhelix
UniParc:UPI0008434724	UniProt:A0A1D6JK15	MapMan:35.2	:	:	:

Description

No Description!

Coordinates

chr1:-:1580261..1580781

Molecular Weight (calculated)

14058.2 Da

IEP (calculated)

9.680

GRAVY (calculated)

0.221

Length

127 amino acids

Sequence
(BLAST)

001: MAPPPPEDLQ CAMNVKRAMS SALAAGDEEL WWLWRCVEAA AKGFAIGVCL KGSLVLFSIL VRIRSRRSHR SRKVGAMTNE EVVVLTVKET VRYGLFLGTF
101: AGSYVSIDEY IAAVWGRKWS LHGTITV

Best Arabidopsis Sequence Match ( AT1G34630.2 )
(BLAST)

001: MSPSDESTNG SRCSSCISSD NDGNDFGKSD EFTCKQCKNS DSKSKSKSVN DSDKLRRIIV ASVKGFTIGT GLKGGLAIFS IVARFARRRR SSPQSRKTGE
101: FSNSEAIAMG IKETLRYGLF LGTFAGTFVS VDEAIAALAG DKRTAKWRAL FAGLVAGPSM LLTGPNTQHT SLAVYILMRA AVLASRCGIK SKRFGTICKP
201: LTWKHGDLFL MCLSSSQILS AYILKQESLP SSYKSFLNKQ GGKDLSILQG VKDIATAQPF TNLRAIEKYY KSVGVDIKLD PTMKVPCTII HGNESCVKHG
301: VTFFLQAYKR ALPVYVPVYL IPALIVHRQD LLKKQYSILG KGLLGTARSS LFLATYCSSA WAWTCLLFRT FETCNIPLVA IATVQTKAIL ITYHC

Arabidopsis Description

At1g34630/F12K21.3 [Source:UniProtKB/TrEMBL;Acc:Q8VZG0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.