Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- cytosol 1
- plasma membrane 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER97254 | Sorghum | plastid | 96.01 | 95.5 |
| Os07t0494900-01 | Rice | endoplasmic reticulum | 31.16 | 91.98 |
| TraesCS2B01G254400.1 | Wheat | plastid | 84.96 | 85.74 |
| TraesCS2D01G236700.1 | Wheat | plastid | 84.42 | 85.5 |
| TraesCS2A01G226700.1 | Wheat | plastid | 84.6 | 85.37 |
| HORVU2Hr1G051560.3 | Barley | cytosol, peroxisome | 76.09 | 85.19 |
| VIT_16s0039g02700.t01 | Wine grape | plasma membrane | 71.38 | 74.48 |
| GSMUA_Achr8P14960_001 | Banana | plasma membrane, plastid | 61.96 | 72.3 |
| KRG92233 | Soybean | plasma membrane | 67.75 | 71.92 |
| PGSC0003DMT400021507 | Potato | plasma membrane | 67.21 | 71.07 |
| Solyc03g093990.2.1 | Tomato | plasma membrane | 67.21 | 71.07 |
| KRH34562 | Soybean | plasma membrane | 67.03 | 70.75 |
| AT5G51150.1 | Thale cress | nucleus, peroxisome, plasma membrane, plastid | 67.39 | 70.06 |
| Zm00001d047018_P004 | Maize | extracellular | 16.49 | 70.0 |
| CDY05839 | Canola | nucleus, peroxisome, plasma membrane | 65.4 | 69.02 |
| CDX71692 | Canola | nucleus, peroxisome, plasma membrane | 65.4 | 69.02 |
| CDY38855 | Canola | plastid | 65.04 | 67.86 |
| CDY32637 | Canola | plastid | 65.04 | 67.86 |
| Bra029183.1-P | Field mustard | plastid | 64.86 | 67.67 |
| KRH71877 | Soybean | cytosol | 16.3 | 62.5 |
| Bra035727.1-P | Field mustard | plastid | 65.22 | 58.63 |
| Zm00001d032062_P001 | Maize | mitochondrion | 23.73 | 34.03 |
| Zm00001d028006_P001 | Maize | plasma membrane | 19.02 | 22.53 |
| Zm00001d027280_P001 | Maize | cytosol, plasma membrane, plastid | 3.62 | 15.75 |
Protein Annotations
| EnsemblPlants:Zm00001d000436_P001 | EnsemblPlants:Zm00001d000436_T001 | EnsemblPlantsGene:Zm00001d000436 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:TMEM135_N | InterPro:Tmem135 | ncoils:Coil | PANTHER:PTHR12459 | PANTHER:PTHR12459:SF6 | PFAM:PF02466 |
| PFAM:PF15982 | SEG:seg | UniParc:UPI0008445AA5 | UniProt:A0A1X7YJ50 | MapMan:35.2 | : |
Description
Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein
Coordinates
chrB73V4_ctg190:+:31288..44855
Molecular Weight (calculated)
61116.2 Da
IEP (calculated)
9.716
GRAVY (calculated)
-0.062
Length
552 amino acids
Sequence
(BLAST)
(BLAST)
001: MPFLSTPSFD LSAGAEPTLG PRSAAPPPPP TAAAHHQPPV SEAAARRLRE AEERLREAIE ELHRHQGGGV KGDGDEQREG ERGCGHDGES CAAHAAGNLC
101: QSFLLSYGVR VGIGILLRAF KLVRRRSYGS LLDLKQLVSE KDLIVREEAC RVGLLFGGFT GSYHALRCFL RRFRKKETPF NAILAGSVAG LAILALDDSS
201: RRRTLSLYLL ARLAQCAYNS AKSKNKFHFW GSHWRHGDAL LFSLACAQVM YAFVMRPESL PKSYQEFILK TGPVAEPVYK VVKECCRGGP VDLTALSAHL
301: SNKRNPDLIN LTTNPSIIPC SVIHPDRASC LAQNVNVVSS TFKKTFPLYF SLTFVPFVVL RLQKFLESPT TTCWRALVGA VRSTTFLSAF VTVFQAAICL
401: HRKVANKDHK LVYWFAGLMS GLSILLEKKA RRAELALYVL PRAGDSLWYI LINRHLLPNI KNAEVALFCM CMGGIMYFLE YEPDTMAPFL RGLIRRFLAS
501: KISNPSPPPP NRNASYSYLQ TLNALEQSRT QPGVDNGLTT SEKYNLESIP GL
101: QSFLLSYGVR VGIGILLRAF KLVRRRSYGS LLDLKQLVSE KDLIVREEAC RVGLLFGGFT GSYHALRCFL RRFRKKETPF NAILAGSVAG LAILALDDSS
201: RRRTLSLYLL ARLAQCAYNS AKSKNKFHFW GSHWRHGDAL LFSLACAQVM YAFVMRPESL PKSYQEFILK TGPVAEPVYK VVKECCRGGP VDLTALSAHL
301: SNKRNPDLIN LTTNPSIIPC SVIHPDRASC LAQNVNVVSS TFKKTFPLYF SLTFVPFVVL RLQKFLESPT TTCWRALVGA VRSTTFLSAF VTVFQAAICL
401: HRKVANKDHK LVYWFAGLMS GLSILLEKKA RRAELALYVL PRAGDSLWYI LINRHLLPNI KNAEVALFCM CMGGIMYFLE YEPDTMAPFL RGLIRRFLAS
501: KISNPSPPPP NRNASYSYLQ TLNALEQSRT QPGVDNGLTT SEKYNLESIP GL
001: MPSSFSKPDL DPSSSPPPIS PLSQDSSEAE RRLREAEERL RDAMAELQRR QRSAARGSHA ELCDHADVSC VANAIGNLCQ SFLLSYGVRV GIGILLRAFK
101: LARGQSYSSL LDLKQLVSEK DLIVREEACR IGLLFGGFTG SYHALRCCLR KWRKKETPLN SVLAGSVAGL SILALDDSNQ RRTLALYLLA RLGQAAYNSA
201: KSKNKFHLWG SHWRHGDSLL FSLACAQVMY SFIMRPETLP KSYREFIQKT GPVARPVYQA VRECCRGGPI DVASLSAYIS SKNEASDVKV EEFASIIPCA
301: AIHPNTNSCL AQNANAMSAT FKKTFPLYFS LTFVPYVVLH LQKFMASPYR TSWLAIRDSV RSTSFLSAFV GIFQAFICAH RKVATKDHKL VYWFAGGAAA
401: LSVMLEKKPR RSELALYVLP RAGDSLWEIL VNRHLLPDIK NAEVALFCGC MGGIMYYLEY EPDTMAPFLR GLIRRFLASQ ISNPSSKYPH SSSYSYLQTL
501: DALKKPKTQE SREGETPKAE EKYNLEAIPG L
101: LARGQSYSSL LDLKQLVSEK DLIVREEACR IGLLFGGFTG SYHALRCCLR KWRKKETPLN SVLAGSVAGL SILALDDSNQ RRTLALYLLA RLGQAAYNSA
201: KSKNKFHLWG SHWRHGDSLL FSLACAQVMY SFIMRPETLP KSYREFIQKT GPVARPVYQA VRECCRGGPI DVASLSAYIS SKNEASDVKV EEFASIIPCA
301: AIHPNTNSCL AQNANAMSAT FKKTFPLYFS LTFVPYVVLH LQKFMASPYR TSWLAIRDSV RSTSFLSAFV GIFQAFICAH RKVATKDHKL VYWFAGGAAA
401: LSVMLEKKPR RSELALYVLP RAGDSLWEIL VNRHLLPDIK NAEVALFCGC MGGIMYYLEY EPDTMAPFLR GLIRRFLASQ ISNPSSKYPH SSSYSYLQTL
501: DALKKPKTQE SREGETPKAE EKYNLEAIPG L
Arabidopsis Description
Gb [Source:UniProtKB/TrEMBL;Acc:Q9LU59]
SUBAcon: [plastid,nucleus,peroxisome,plasma membrane]
SUBAcon: [plastid,nucleus,peroxisome,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.