CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG92233	Soybean	plasma membrane	90.28	25.0
KRH34562	Soybean	plasma membrane	86.11	23.71
GSMUA_Achr8P14960_001	Banana	plasma membrane, plastid	65.28	19.87
Solyc03g093990.2.1	Tomato	plasma membrane	68.75	18.97
PGSC0003DMT400021507	Potato	plasma membrane	68.75	18.97
AT5G51150.1	Thale cress	nucleus, peroxisome, plasma membrane, plastid	69.44	18.83
CDY05839	Canola	nucleus, peroxisome, plasma membrane	68.06	18.74
CDX71692	Canola	nucleus, peroxisome, plasma membrane	68.06	18.74
VIT_16s0039g02700.t01	Wine grape	plasma membrane	66.67	18.15
CDY32637	Canola	plastid	65.97	17.96
CDY38855	Canola	plastid	65.28	17.77
Bra029183.1-P	Field mustard	plastid	65.28	17.77
TraesCS2B01G254400.1	Wheat	plastid	62.5	16.45
TraesCS2A01G226700.1	Wheat	plastid	62.5	16.45
EER97254	Sorghum	plastid	63.19	16.4
TraesCS2D01G236700.1	Wheat	plastid	61.81	16.33
Zm00001d000436_P001	Maize	plastid	62.5	16.3
Bra035727.1-P	Field mustard	plastid	68.06	15.96
HORVU2Hr1G051560.3	Barley	cytosol, peroxisome	52.08	15.21
KRH37587	Soybean	plastid	12.5	6.9
KRH12626	Soybean	cytosol	15.28	4.4
Os07t0494900-01	Rice	endoplasmic reticulum	0.69	0.53

Protein Annotations

EMBL:ACUP02001097	EnsemblPlants:KRH71877	EnsemblPlantsGene:GLYMA_02G174600	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005777	InterPro:Tmem135	ncoils:Coil	PANTHER:PTHR12459	PANTHER:PTHR12459:SF6
ProteinID:KRH71877	ProteinID:KRH71877.1	SEG:seg	UniParc:UPI00023BD67A	UniProt:K7K944	MapMan:35.2

Description

hypothetical protein

Coordinates

chr2:-:27957128..27958046

Molecular Weight (calculated)

16114.5 Da

IEP (calculated)

7.860

GRAVY (calculated)

-0.224

Length

144 amino acids

Sequence
(BLAST)

001: MAPPSSPPLV DNCDAERRLR EAEERLRDAI EELQRRQRRA ASHAQQHRHV DSPPCDHGPD ESCLAHAIGN LCLTFLLSYG VRVGIGILLL AFKLVGGQSY
101: SSLLDLKQHV SEKDLIVREE ACRIGILFGG FTGFYHALRC LLRK

Best Arabidopsis Sequence Match ( AT5G51150.1 )
(BLAST)

001: MPSSFSKPDL DPSSSPPPIS PLSQDSSEAE RRLREAEERL RDAMAELQRR QRSAARGSHA ELCDHADVSC VANAIGNLCQ SFLLSYGVRV GIGILLRAFK
101: LARGQSYSSL LDLKQLVSEK DLIVREEACR IGLLFGGFTG SYHALRCCLR KWRKKETPLN SVLAGSVAGL SILALDDSNQ RRTLALYLLA RLGQAAYNSA
201: KSKNKFHLWG SHWRHGDSLL FSLACAQVMY SFIMRPETLP KSYREFIQKT GPVARPVYQA VRECCRGGPI DVASLSAYIS SKNEASDVKV EEFASIIPCA
301: AIHPNTNSCL AQNANAMSAT FKKTFPLYFS LTFVPYVVLH LQKFMASPYR TSWLAIRDSV RSTSFLSAFV GIFQAFICAH RKVATKDHKL VYWFAGGAAA
401: LSVMLEKKPR RSELALYVLP RAGDSLWEIL VNRHLLPDIK NAEVALFCGC MGGIMYYLEY EPDTMAPFLR GLIRRFLASQ ISNPSSKYPH SSSYSYLQTL
501: DALKKPKTQE SREGETPKAE EKYNLEAIPG L

Arabidopsis Description

Gb [Source:UniProtKB/TrEMBL;Acc:Q9LU59]
SUBAcon: [peroxisome,plastid,nucleus,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.