Factsheet for Bra035727.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
mitochondrion 2
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY05839	Canola	nucleus, peroxisome, plasma membrane	84.69	99.43
CDX71692	Canola	nucleus, peroxisome, plasma membrane	83.88	98.47
AT5G51150.1	Thale cress	nucleus, peroxisome, plasma membrane, plastid	78.18	90.4
Bra029183.1-P	Field mustard	plastid	76.06	88.28
VIT_16s0039g02700.t01	Wine grape	plasma membrane	65.31	75.8
KRG92233	Soybean	plasma membrane	62.7	74.04
PGSC0003DMT400021507	Potato	plasma membrane	62.7	73.75
Solyc03g093990.2.1	Tomato	plasma membrane	62.38	73.37
KRH34562	Soybean	plasma membrane	61.73	72.47
GSMUA_Achr8P14960_001	Banana	plasma membrane, plastid	52.61	68.29
KRH71877	Soybean	cytosol	15.96	68.06
Os07t0494900-01	Rice	endoplasmic reticulum	20.36	66.84
HORVU2Hr1G051560.3	Barley	cytosol, peroxisome	53.42	66.53
EER97254	Sorghum	plastid	59.12	65.41
Zm00001d000436_P001	Maize	plastid	58.63	65.22
TraesCS2D01G236700.1	Wheat	plastid	55.7	62.75
TraesCS2A01G226700.1	Wheat	plastid	55.86	62.71
TraesCS2B01G254400.1	Wheat	plastid	55.86	62.71
Bra034434.1-P	Field mustard	cytosol	15.8	21.65
Bra028061.1-P	Field mustard	cytosol	15.96	19.88

Protein Annotations

EnsemblPlants:Bra035727.1	EnsemblPlants:Bra035727.1-P	EnsemblPlantsGene:Bra035727	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:TMEM135_N	InterPro:Tmem135	ncoils:Coil	PANTHER:PTHR12459	PANTHER:PTHR12459:SF6	PFAM:PF02466
PFAM:PF15982	SEG:seg	UniParc:UPI0002543E29	UniProt:M4F3S7	MapMan:35.2	:

Description

AT5G51150 (E=6e-250) | unknown protein

Coordinates

chrA04:-:12500354..12504200

Molecular Weight (calculated)

67986.1 Da

IEP (calculated)

9.109

GRAVY (calculated)

-0.091

Length

614 amino acids

Sequence
(BLAST)

001: MLSVIVCGGK RSLFETSSPP LSKKLCSLSP SRFSSSFLLD HLTAIFPDMD THLHLESANQ KPELSLVQEE AKVAVRGAGG SSGKEEVLNL EMPSSFSKPS
101: LDSPLSLDGA EAEHRLREAE ERLREAMAEL QRRQRSAARG SHGDLCDHAD VSCVANAIGN LCQSFLLSYG VRVGIGILLR AFKLARGQSY SSLLDLKQLV
201: SEKDLIVREE ACRIGLLFGG FTGSYHALRC CLRKWRKKET PLNSVLAGSI AGLSVLALDD SNQRRTLALY LLARLGQAAY NSAKSKNKFH LWGSHWRHGD
301: SLLFSLACSQ VMYAFIMRPE TLPKSYREFI QKTGPVARPV YQAVRECCRG GPIDVASLSA YISSKNEASD VMVQEFASII PCSAIHPHTN SCMAQNANAM
401: SATFKKTFPL YFSLTFVPYV VLHLQKFMAS PYRTSWNAIR DSVRSTSFLS AFVGIFQAFI CAHRKVASKD HKLVYWFAGG VAALSVMLEK KPRRSELALY
501: VLPRAGDSLW EILVNRHILP NIKNAEVAVF CGCMGGIMYY LEHEPDTLAP FLRGLIRRFL ASQISNPSSK ISQSSSYMYL QTLDALEKPK AAENREGETQ
601: KAEEKYNLEA IPGL

Best Arabidopsis Sequence Match ( AT5G51150.1 )
(BLAST)

001: MPSSFSKPDL DPSSSPPPIS PLSQDSSEAE RRLREAEERL RDAMAELQRR QRSAARGSHA ELCDHADVSC VANAIGNLCQ SFLLSYGVRV GIGILLRAFK
101: LARGQSYSSL LDLKQLVSEK DLIVREEACR IGLLFGGFTG SYHALRCCLR KWRKKETPLN SVLAGSVAGL SILALDDSNQ RRTLALYLLA RLGQAAYNSA
201: KSKNKFHLWG SHWRHGDSLL FSLACAQVMY SFIMRPETLP KSYREFIQKT GPVARPVYQA VRECCRGGPI DVASLSAYIS SKNEASDVKV EEFASIIPCA
301: AIHPNTNSCL AQNANAMSAT FKKTFPLYFS LTFVPYVVLH LQKFMASPYR TSWLAIRDSV RSTSFLSAFV GIFQAFICAH RKVATKDHKL VYWFAGGAAA
401: LSVMLEKKPR RSELALYVLP RAGDSLWEIL VNRHLLPDIK NAEVALFCGC MGGIMYYLEY EPDTMAPFLR GLIRRFLASQ ISNPSSKYPH SSSYSYLQTL
501: DALKKPKTQE SREGETPKAE EKYNLEAIPG L

Arabidopsis Description

Gb [Source:UniProtKB/TrEMBL;Acc:Q9LU59]
SUBAcon: [plastid,nucleus,peroxisome,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.