Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- plasma membrane 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER92718 | Sorghum | cytosol, peroxisome, plastid | 93.78 | 92.78 |
| Os03t0190900-01 | Rice | cytosol | 83.48 | 80.87 |
| TraesCS4A01G406900.1 | Wheat | plasma membrane | 82.19 | 79.46 |
| TraesCS4B01G306200.1 | Wheat | cytosol, peroxisome, plasma membrane | 81.97 | 79.09 |
| TraesCS4D01G304400.1 | Wheat | cytosol, peroxisome, plasma membrane | 81.76 | 78.72 |
| GSMUA_Achr3P01670_001 | Banana | cytosol, peroxisome, plastid | 71.46 | 70.11 |
| Zm00001d027280_P001 | Maize | cytosol, plasma membrane, plastid | 18.67 | 68.5 |
| GSMUA_Achr6P10380_001 | Banana | cytosol, mitochondrion, plastid | 73.18 | 67.26 |
| HORVU4Hr1G078610.3 | Barley | mitochondrion | 78.11 | 65.82 |
| Zm00001d000436_P001 | Maize | plastid | 22.53 | 19.02 |
| Zm00001d047018_P004 | Maize | extracellular | 4.29 | 15.38 |
| Zm00001d032062_P001 | Maize | mitochondrion | 12.02 | 14.55 |
Protein Annotations
| EMBL:BT067175 | EnsemblPlants:Zm00001d028006_P001 | EnsemblPlants:Zm00001d028006_T001 | EnsemblPlantsGene:Zm00001d028006 | InterPro:TMEM135_N | InterPro:Tmem135 |
| PANTHER:PTHR12459 | PANTHER:PTHR12459:SF14 | PFAM:PF15982 | ProteinID:ONL94461.1 | SEG:seg | UniParc:UPI000195CB40 |
| UniProt:C0PFV6 | MapMan:35.2 | : | : | : | : |
Description
No Description!
Coordinates
chr1:-:20028789..20032918
Molecular Weight (calculated)
51336.3 Da
IEP (calculated)
10.055
GRAVY (calculated)
0.218
Length
466 amino acids
Sequence
(BLAST)
(BLAST)
001: MAPPPPEDLQ CAVNVKCAAP PALAAGDGEL RWLRRCVEAA AKGFAIGAGL KGGLALFSVL VRIRSRRSPR SRKAGAMTNE EAVVLAVKET VRYGLFLGTF
101: AGSYVSVDEY IAAVWGRKRT ARWRSFLAGL IAGPSMLLTG PGTQHTSLAI YILMRAAVLA SRCGIKSKRF GKICKPLTWS HGDVFLMCLS SAQILSAYIL
201: KQDSLPSSYK SFLNKHGGKD LTILQGVKDV VNHTAFSNLV GIEKYYKSVG VDIKLDPNMK VPCSIVHGNQ SCTGHVFSFL LQAYGRAVPV YVPVYLVPAL
301: VVHRQHLMKR PYSIIGKSFL GVARSSLFLS VYCASAWAWT CLLFRIFRRA NTPLVILGTF PTGLALLIEK KSRRIEISLY CLARAIESFF TWMTDAGLCP
401: PILQIKRADV VVFSIATSII MHCYAQEREV FRSKYLNVLD WVFGVPPPPD SEDKNCYLPD EAKKCQ
101: AGSYVSVDEY IAAVWGRKRT ARWRSFLAGL IAGPSMLLTG PGTQHTSLAI YILMRAAVLA SRCGIKSKRF GKICKPLTWS HGDVFLMCLS SAQILSAYIL
201: KQDSLPSSYK SFLNKHGGKD LTILQGVKDV VNHTAFSNLV GIEKYYKSVG VDIKLDPNMK VPCSIVHGNQ SCTGHVFSFL LQAYGRAVPV YVPVYLVPAL
301: VVHRQHLMKR PYSIIGKSFL GVARSSLFLS VYCASAWAWT CLLFRIFRRA NTPLVILGTF PTGLALLIEK KSRRIEISLY CLARAIESFF TWMTDAGLCP
401: PILQIKRADV VVFSIATSII MHCYAQEREV FRSKYLNVLD WVFGVPPPPD SEDKNCYLPD EAKKCQ
001: MSPSDESTNG SRCSSCISSD NDGNDFGKSD EFTCKQCKNS DSKSKSKSVN DSDKLRRIIV ASVKGFTIGT GLKGGLAIFS IVARFARRRR SSPQSRKTGE
101: FSNSEAIAMG IKETLRYGLF LGTFAGTFVS VDEAIAALAG DKRTAKWRAL FAGLVAGPSM LLTGPNTQHT SLAVYILMRA AVLASRCGIK SKRFGTICKP
201: LTWKHGDLFL MCLSSSQILS AYILKQESLP SSYKSFLNKQ GGKDLSILQG VKDIATAQPF TNLRAIEKYY KSVGVDIKLD PTMKVPCTII HGNESCVKHG
301: VTFFLQAYKR ALPVYVPVYL IPALIVHRQD LLKKQYSILG KGLLGTARSS LFLATYCSSA WAWTCLLFRT FETCNIPLVA IATFPTGLAL AIEKKSRRIE
401: ISLYCLARAI ESFFTCMTEA GYIRPPKSLR RADVVVFSVS TAIIMHCYAQ ERDVFRSKYL NVLDWVFGVP PPPPAPSCET T
101: FSNSEAIAMG IKETLRYGLF LGTFAGTFVS VDEAIAALAG DKRTAKWRAL FAGLVAGPSM LLTGPNTQHT SLAVYILMRA AVLASRCGIK SKRFGTICKP
201: LTWKHGDLFL MCLSSSQILS AYILKQESLP SSYKSFLNKQ GGKDLSILQG VKDIATAQPF TNLRAIEKYY KSVGVDIKLD PTMKVPCTII HGNESCVKHG
301: VTFFLQAYKR ALPVYVPVYL IPALIVHRQD LLKKQYSILG KGLLGTARSS LFLATYCSSA WAWTCLLFRT FETCNIPLVA IATFPTGLAL AIEKKSRRIE
401: ISLYCLARAI ESFFTCMTEA GYIRPPKSLR RADVVVFSVS TAIIMHCYAQ ERDVFRSKYL NVLDWVFGVP PPPPAPSCET T
Arabidopsis Description
At1g34630/F12K21.3 [Source:UniProtKB/TrEMBL;Acc:Q8VZG0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.