Factsheet for Os03t0190900-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
mitochondrion 3
cytosol 2
nucleus 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d028006_P001	Maize	plasma membrane	80.87	83.48
EER92718	Sorghum	cytosol, peroxisome, plastid	81.29	83.01
TraesCS4A01G406900.1	Wheat	plasma membrane	80.67	80.5
TraesCS4B01G306200.1	Wheat	cytosol, peroxisome, plasma membrane	80.25	79.92
TraesCS4D01G304400.1	Wheat	cytosol, peroxisome, plasma membrane	79.83	79.34
GSMUA_Achr3P01670_001	Banana	cytosol, peroxisome, plastid	70.89	71.79
GSMUA_Achr6P10380_001	Banana	cytosol, mitochondrion, plastid	71.93	68.24
HORVU4Hr1G078610.3	Barley	mitochondrion	77.96	67.81
AT1G34630.1	Thale cress	nucleus	65.07	65.07
Bra034434.1-P	Field mustard	cytosol	60.08	64.51
CDX73310	Canola	plastid	62.99	63.52
CDY28404	Canola	cytosol	60.5	63.26
CDY03142	Canola	cytosol, peroxisome, plastid	63.62	62.32
Bra028061.1-P	Field mustard	cytosol	63.62	62.07
KRH12626	Soybean	cytosol	64.45	62.0
CDY12034	Canola	cytosol, peroxisome, plastid	63.62	61.94
KRH37587	Soybean	plastid	31.39	57.85
VIT_18s0001g05640.t01	Wine grape	cytosol	65.07	54.34
PGSC0003DMT400016388	Potato	cytosol, nucleus, peroxisome	54.89	53.77
Solyc04g074140.2.1	Tomato	cytosol, nucleus, peroxisome	54.89	53.77
Os07t0494900-01	Rice	endoplasmic reticulum	8.94	22.99

Protein Annotations

EnsemblPlants:Os03t0190900-01	EnsemblPlantsGene:Os03g0190900	EntrezGene:4331902	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005777	InterPro:TMEM135_N	InterPro:Tmem135	PANTHER:PTHR12459	PANTHER:PTHR12459:SF14
PFAM:PF15982	ProteinID:AAN64155.1	ProteinID:ABF94397.1	ProteinID:BAS82716.1	RefSeq:XP_015628492.1	SEG:seg
UniParc:UPI00000AD2D8	UniProt:Q8H7M5	MapMan:35.2	:	:	:

Description

Similar to F12K21.3. (Os03t0190900-01)

Coordinates

chr3:-:4720699..4724099

Molecular Weight (calculated)

52488.5 Da

IEP (calculated)

9.740

GRAVY (calculated)

0.219

Length

481 amino acids

Sequence
(BLAST)

001: MAPTSPEELK CAANGGCAAA SPGGTPRAGH YLPAVPAAVE GELRWLRRCV EAAAKGFAIG AGLKGGLALF SVLVRLRSRR RSPRSRKVGA MTNEEAVVLA
101: LKETVRYGLF LGTFAGSYVS VDECIAGIWG RKRTARWRSL LAGLIAGPSM LLTGPGTQHT SLAIYILMRA AVLASRCGIK SKRFGNICKP LTWSHGDIFL
201: MCLSSAQILS AYILSQESLP STYKAFLNKH GGKDLTILQG VKEVVNHTAF SNLAGIEKYY KSVGVDLKLD PNMKVPCSIV HGNQSCAGHF ITFLFQAYGR
301: AVPVYVPVYL VPALVVHRQD LLKRPYPIIG KNLLGTARSS LFLSVYCASA WAWTCLLFRI FQSCNTPLVV LATFPTGLAL LIEKKSRRIE IALYCFARAI
401: ESFFTCMTDA GLCPPILQIK RADVVVFSMA TSIIMHCYAQ EREVFRSKYL NVLDWVFGVP PPSDEESNKD FPSDDGTKKI C

Best Arabidopsis Sequence Match ( AT1G34630.1 )
(BLAST)

001: MSPSDESTNG SRCSSCISSD NDGNDFGKSD EFTCKQCKNS DSKSKSKSVN DSDKLRRIIV ASVKGFTIGT GLKGGLAIFS IVARFARRRR SSPQSRKTGE
101: FSNSEAIAMG IKETLRYGLF LGTFAGTFVS VDEAIAALAG DKRTAKWRAL FAGLVAGPSM LLTGPNTQHT SLAVYILMRA AVLASRCGIK SKRFGTICKP
201: LTWKHGDLFL MCLSSSQILS AYILKQESLP SSYKSFLNKQ GGKDLSILQG VKDIATAQPF TNLRAIEKYY KSVGVDIKLD PTMKVPCTII HGNESCVKHG
301: VTFFLQAYKR ALPVYVPVYL IPALIVHRQD LLKKQYSILG KGLLGTARSS LFLATYCSSA WAWTCLLFRT FETCNIPLVA IATFPTGLAL AIEKKSRRIE
401: ISLYCLARAI ESFFTCMTEA GYIRPPKSLR RADVVVFSVS TAIIMHCYAQ ERDVFRSKYL NVLDWVFGVP PPPPAPSCET T

Arabidopsis Description

At1g34630/F12K21.3 [Source:UniProtKB/TrEMBL;Acc:Q8VZG0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.