CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

extracellular 8
endoplasmic reticulum 5
vacuole 7
plasma membrane 5
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	secretory
BaCelLo:	secretory
EpiLoc:	extracellular
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

endoplasmic reticulum: 27224218

msms PMID: 27224218 doi

X Wang, S Komatsu

Graduate School of Life and Environmental Sciences, University of Tsukuba , Tsukuba 305-8572, Japan., National Institute of Crop Science, National Agriculture and Food Research Organization , Tsukuba 305-8518, Japan.

PPI

Inferred distinct locusB in Crop

locusB	locations
KRH11076
KRH21197
KRH42923
KRH42926
KRH45251
KRH59035
KRH59036

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G17860.1	KRH11076	AT4G19030.1	21798944
AT1G17860.1	KRH21197	AT4G19030.1	21798944
AT1G17860.1	KRH42923	AT4G19030.1	21798944
AT1G17860.1	KRH42926	AT4G19030.1	21798944
AT1G17860.1	KRH45251	AT4G19030.1	21798944
AT1G17860.1	KRH59035	AT4G19030.1	21798944
AT1G17860.1	KRH59036	AT4G19030.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH75900	Soybean	cytosol	34.12	80.0
KRH75892	Soybean	cytosol, extracellular, vacuole	50.71	70.86
KRH38870	Soybean	endoplasmic reticulum	58.29	58.85
KRH38869	Soybean	golgi, plasma membrane, vacuole	54.03	53.52
KRH38863	Soybean	endoplasmic reticulum	54.5	53.49
KRH09379	Soybean	nucleus	50.71	50.0
KRH38856	Soybean	extracellular	44.55	50.0
KRH38860	Soybean	extracellular	46.92	49.75
KRH38857	Soybean	extracellular	46.92	49.75
KRH38855	Soybean	extracellular	46.92	49.75
KRH09376	Soybean	extracellular	45.97	48.5
KRH38858	Soybean	extracellular	45.5	48.24
KRH38868	Soybean	endoplasmic reticulum	48.82	47.69
KRH38861	Soybean	extracellular	45.97	45.12
CDY19181	Canola	extracellular	38.39	42.19
KRH09377	Soybean	endoplasmic reticulum	39.81	41.79
Bra025942.1-P	Field mustard	extracellular	37.44	41.15
CDX96746	Canola	extracellular	37.91	41.03
CDY26209	Canola	extracellular	36.97	40.62
Bra016580.1-P	Field mustard	extracellular	37.44	40.51
CDX83886	Canola	extracellular	36.97	40.0
Solyc03g098670.1.1	Tomato	extracellular	37.91	39.8
KRH09380	Soybean	nucleus	37.44	38.73
AT1G17860.1	Thale cress	extracellular	35.07	37.76
PGSC0003DMT400026293	Potato	vacuole	36.97	37.5
KRH38871	Soybean	mitochondrion	36.02	37.44
GSMUA_Achr1P01860_001	Banana	extracellular	34.6	36.5
GSMUA_Achr5P19420_001	Banana	extracellular	38.39	36.49
Os04t0526600-01	Rice	extracellular	30.33	32.0
HORVU2Hr1G090750.1	Barley	extracellular	17.54	30.33
TraesCS2A01G375400.1	Wheat	extracellular, vacuole	28.91	30.05
PGSC0003DMT400026262	Potato	vacuole	34.6	29.8
TraesCS2B01G392500.1	Wheat	golgi	28.44	29.7
Solyc03g098730.1.1	Tomato	nucleus	34.6	29.67
TraesCS2D01G371800.1	Wheat	extracellular	27.49	28.57
KRH27434	Soybean	extracellular	25.12	26.77
KRH44855	Soybean	extracellular	26.07	26.44
KRH44856	Soybean	extracellular	25.12	26.11
KRH13021	Soybean	extracellular	25.12	25.73
EES12537	Sorghum	vacuole	27.49	25.22
KRH27433	Soybean	nucleus	23.22	25.0
Zm00001d002960_P001	Maize	extracellular	17.54	24.34
KXG23922	Sorghum	extracellular	24.17	23.5
VIT_00s0207g00030.t01	Wine grape	extracellular, nucleus	0.47	0.08

Protein Annotations

EntrezGene:100779308	Gene3D:2.80.10.50	MapMan:35.1	EMBL:ACUP02005882	EnsemblPlantsGene:GLYMA_09G163200	GO:GO:0003674
GO:GO:0004866	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0010951	GO:GO:0019538
GO:GO:0030234	MEROPS:I03.030	UniProt:I1L3T9	EnsemblPlants:KRH38862	ProteinID:KRH38862	ProteinID:KRH38862.1
InterPro:Kunitz_inhibitor_STI-like_sf	PFAM:PF00197	PRINTS:PR00291	PANTHER:PTHR33107	PANTHER:PTHR33107:SF9	InterPro:Prot_inh_Kunz-lg
SMART:SM00452	SUPFAM:SSF50386	SignalP:SignalP-noTM	UniParc:UPI0002338A52	SEG:seg	:

Description

hypothetical protein

Coordinates

chr9:-:38783923..38784788

Molecular Weight (calculated)

23339.4 Da

IEP (calculated)

9.037

GRAVY (calculated)

-0.060

Length

211 amino acids

Sequence
(BLAST)

001: MKTASLASLV LILLALSSQS LLGEAETSPE QVLDTSGKVL REGVNYNILI SMPYTSCRSP QGLGLSKIGN SCPLDVVVVD INHRLPLRFI PVNPKKGVIR
101: VATDLNIMFP DRNVTCPHHS TVWKVDNFHV SKGHRLVTTG GVVGYPGRET IGNWFKIEKY DGAYNYKLVY CPSVCPSCKH ECKNVGMVVD QNGNQRLALS
201: DVPYQFRFFK A

Best Arabidopsis Sequence Match ( AT1G17860.1 )
(BLAST)

001: MSSLLYIFLL LAVFISHRGV TTEAAVEPVK DINGKSLLTG VNYYILPVIR GRGGGLTMSN LKTETCPTSV IQDQFEVSQG LPVKFSPYDK SRTIPVSTDV
101: NIKFSPTSIW ELANFDETTK QWFISTCGVE GNPGQKTVDN WFKIDKFEKD YKIRFCPTVC NFCKVICRDV GVFVQDGKRR LALSDVPLKV MFKRAY

Arabidopsis Description

KTI2Kunitz trypsin inhibitor 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LMU2]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.