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Wine grape
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Wine grape
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular, nucleus

Predictor Summary:
  • nucleus 3
  • extracellular 2
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular, nucleus
Any Predictor:nucleus, secretory
BaCelLo:nucleus
MultiLoc:extracellular
Plant-mPloc:nucleus
PProwler:secretory
WoLF PSORT:nucleus
PPI

Inferred distinct locusB in Crop

locusBlocations
VIT_10s0003g01830.t01

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G17860.1 VIT_10s0003g01830.t01 AT4G19030.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
VIT_17s0119g00230.t01 Wine grape nucleus, vacuole 99.67 58.33
KRH75900 Soybean cytosol 0.16 2.22
HORVU2Hr1G090750.1 Barley extracellular 0.08 0.82
KRH75892 Soybean cytosol, extracellular, vacuole 0.08 0.66
Zm00001d002960_P001 Maize extracellular 0.08 0.66
CDY19181 Canola extracellular 0.08 0.52
CDY26209 Canola extracellular 0.08 0.52
Bra025942.1-P Field mustard extracellular 0.08 0.52
KRH38858 Soybean extracellular 0.08 0.5
Os04t0526600-01 Rice extracellular 0.08 0.5
Solyc03g098670.1.1 Tomato extracellular 0.08 0.5
TraesCS2B01G392500.1 Wheat golgi 0.08 0.5
VIT_17s0119g00280.t01 Wine grape extracellular 0.08 0.49
VIT_17s0119g00150.t01 Wine grape extracellular 0.08 0.49
TraesCS2D01G371800.1 Wheat extracellular 0.08 0.49
TraesCS2A01G375400.1 Wheat extracellular, vacuole 0.08 0.49
VIT_17s0119g00120.t01 Wine grape extracellular 0.08 0.49
PGSC0003DMT400026293 Potato vacuole 0.08 0.48
KRH38862 Soybean endoplasmic reticulum 0.08 0.47
KRH38861 Soybean extracellular 0.08 0.47
KXG23922 Sorghum extracellular 0.08 0.46
EES12537 Sorghum vacuole 0.08 0.43
VIT_00s0270g00120.t01 Wine grape extracellular 0.0 0.0
Solyc03g098730.1.1 Tomato nucleus 0.0 0.0
VIT_17s0119g00160.t01 Wine grape cytosol, plastid, vacuole 0.0 0.0
VIT_17s0119g00180.t01 Wine grape cytosol 0.0 0.0
PGSC0003DMT400026262 Potato vacuole 0.0 0.0
VIT_17s0119g00220.t01 Wine grape cytosol 0.0 0.0
VIT_17s0119g00240.t01 Wine grape cytosol, extracellular, vacuole 0.0 0.0
KRH38869 Soybean golgi, plasma membrane, vacuole 0.0 0.0
KRH09380 Soybean nucleus 0.0 0.0
Bra016580.1-P Field mustard extracellular 0.0 0.0
CDX83886 Canola extracellular 0.0 0.0
CDX96746 Canola extracellular 0.0 0.0
GSMUA_Achr1P01860_001 Banana extracellular 0.0 0.0
GSMUA_Achr5P19420_001 Banana extracellular 0.0 0.0
KRH09376 Soybean extracellular 0.0 0.0
KRH09377 Soybean endoplasmic reticulum 0.0 0.0
KRH09379 Soybean nucleus 0.0 0.0
KRH38871 Soybean mitochondrion 0.0 0.0
KRH38855 Soybean extracellular 0.0 0.0
KRH38856 Soybean extracellular 0.0 0.0
KRH38857 Soybean extracellular 0.0 0.0
KRH38860 Soybean extracellular 0.0 0.0
KRH38863 Soybean endoplasmic reticulum 0.0 0.0
KRH38868 Soybean endoplasmic reticulum 0.0 0.0
AT1G17860.1 Thale cress extracellular 0.0 0.0
KRH38870 Soybean endoplasmic reticulum 0.0 0.0
Protein Annotations
ArrayExpress:VIT_00s0207g00030EnsemblPlants:VIT_00s0207g00030.t01EnsemblPlantsGene:VIT_00s0207g00030ncoils:CoilSEG:segUniParc:UPI0001BE50CA
MapMan:35.2:::::
Description
No Description!
Coordinates
chrUn:+:12355081..12360881
Molecular Weight (calculated)
590.8 Da
IEP (calculated)
9.700
GRAVY (calculated)
0.004
Length
1226 amino acids
Sequence
(BLAST)
0001: MXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXSXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
0101: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
0201: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
0301: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
0401: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
0501: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
0601: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
0701: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
0801: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
0901: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
1001: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
1101: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
1201: XXXXXXXXXX XXXXXXXXXX XXXLKL
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.