CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

extracellular 8
endoplasmic reticulum 5
vacuole 7
plasma membrane 5
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	secretory
BaCelLo:	secretory
EpiLoc:	extracellular
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

endoplasmic reticulum: 27224218

msms PMID: 27224218 doi

X Wang, S Komatsu

Graduate School of Life and Environmental Sciences, University of Tsukuba , Tsukuba 305-8572, Japan., National Institute of Crop Science, National Agriculture and Food Research Organization , Tsukuba 305-8518, Japan.

PPI

Inferred distinct locusB in Crop

locusB	locations
KRH11076
KRH21197
KRH42923
KRH42926
KRH45251
KRH59035
KRH59036

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G17860.1	KRH11076	AT4G19030.1	21798944
AT1G17860.1	KRH21197	AT4G19030.1	21798944
AT1G17860.1	KRH42923	AT4G19030.1	21798944
AT1G17860.1	KRH42926	AT4G19030.1	21798944
AT1G17860.1	KRH45251	AT4G19030.1	21798944
AT1G17860.1	KRH59035	AT4G19030.1	21798944
AT1G17860.1	KRH59036	AT4G19030.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH38858	Soybean	extracellular	68.16	68.84
KRH38857	Soybean	extracellular	67.66	68.34
KRH38860	Soybean	extracellular	66.17	66.83
KRH09376	Soybean	extracellular	66.17	66.5
KRH38855	Soybean	extracellular	65.67	66.33
KRH38856	Soybean	extracellular	60.2	64.36
KRH38870	Soybean	endoplasmic reticulum	47.26	45.45
KRH38869	Soybean	golgi, plasma membrane, vacuole	47.26	44.6
KRH38863	Soybean	endoplasmic reticulum	46.77	43.72
KRH38861	Soybean	extracellular	44.78	41.86
CDX96746	Canola	extracellular	39.8	41.03
KRH09379	Soybean	nucleus	42.79	40.19
CDY26209	Canola	extracellular	38.31	40.1
Bra016580.1-P	Field mustard	extracellular	38.81	40.0
CDX83886	Canola	extracellular	38.81	40.0
KRH38862	Soybean	endoplasmic reticulum	41.79	39.81
Bra025942.1-P	Field mustard	extracellular	36.82	38.54
CDY19181	Canola	extracellular	36.82	38.54
KRH38868	Soybean	endoplasmic reticulum	41.29	38.43
Solyc03g098670.1.1	Tomato	extracellular	36.82	36.82
KRH09380	Soybean	nucleus	37.31	36.76
AT1G17860.1	Thale cress	extracellular	35.82	36.73
KRH38871	Soybean	mitochondrion	36.82	36.45
KRH75900	Soybean	cytosol	15.92	35.56
PGSC0003DMT400026293	Potato	vacuole	34.83	33.65
GSMUA_Achr5P19420_001	Banana	extracellular	36.82	33.33
KRH75892	Soybean	cytosol, extracellular, vacuole	24.88	33.11
GSMUA_Achr1P01860_001	Banana	extracellular	31.34	31.5
Os04t0526600-01	Rice	extracellular	31.34	31.5
TraesCS2A01G375400.1	Wheat	extracellular, vacuole	30.35	30.05
TraesCS2D01G371800.1	Wheat	extracellular	29.85	29.56
KRH44856	Soybean	extracellular	29.35	29.06
HORVU2Hr1G090750.1	Barley	extracellular	17.41	28.69
PGSC0003DMT400026262	Potato	vacuole	34.83	28.57
TraesCS2B01G392500.1	Wheat	golgi	27.86	27.72
Solyc03g098730.1.1	Tomato	nucleus	32.84	26.83
KRH13021	Soybean	extracellular	27.36	26.7
KRH44855	Soybean	extracellular	27.36	26.44
Zm00001d002960_P001	Maize	extracellular	19.9	26.32
KRH27434	Soybean	extracellular	25.37	25.76
EES12537	Sorghum	vacuole	29.35	25.65
KRH27433	Soybean	nucleus	23.88	24.49
KXG23922	Sorghum	extracellular	24.38	22.58
VIT_00s0207g00030.t01	Wine grape	extracellular, nucleus	0.0	0.0

Protein Annotations

EntrezGene:100812268	Gene3D:2.80.10.50	MapMan:35.1	EMBL:ACUP02010276	EnsemblPlantsGene:GLYMA_16G212200	GO:GO:0003674
GO:GO:0004866	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0010951	GO:GO:0019538
GO:GO:0030234	MEROPS:I03.030	UniProt:I1MQG3	EnsemblPlants:KRH09377	ProteinID:KRH09377	ProteinID:KRH09377.1
InterPro:Kunitz_inhibitor_STI-like_sf	PFAM:PF00197	PRINTS:PR00291	PANTHER:PTHR33107	PANTHER:PTHR33107:SF6	InterPro:Prot_inh_Kunz-lg
SMART:SM00452	SUPFAM:SSF50386	SignalP:SignalP-noTM	UniParc:UPI000233B1E9	:	:

Description

hypothetical protein

Coordinates

chr16:-:37060096..37061062

Molecular Weight (calculated)

22258.5 Da

IEP (calculated)

4.795

GRAVY (calculated)

-0.000

Length

201 amino acids

Sequence
(BLAST)

001: MKMTLVTLVL VFALITKALA GPASEPVLDA LGKKVRADSI YYIVPASSDI GGLASARTDV DCPLDVVAVD GDLGLPLSFT PVNDKKGIIR VSSDLNIYFT
101: SYTIFCPQTT VWKLKYYDDS TSQWFVTTGG ELGHPSSQTV ANWFKIEKYE DAYKLVYCPS VCSDCNHQCS DIGIYQDQYG KRLALSSEPY KVQFERCWAC
201: E

Best Arabidopsis Sequence Match ( AT1G73260.1 )
(BLAST)

001: MTKTTKTMNP KFYLVLALTA VLASNAYGAV VDIDGNAMFH ESYYVLPVIR GRGGGLTLAG RGGQPCPYDI VQESSEVDEG IPVKFSNWRL KVAFVPESQN
101: LNIETDVGAT ICIQSTYWRV GEFDHERKQY FVVAGPKPEG FGQDSLKSFF KIEKSGEDAY KFVFCPRTCD SGNPKCSDVG IFIDELGVRR LALSDKPFLV
201: MFKKANVTEV SSKTM

Arabidopsis Description

KTI1Kunitz trypsin inhibitor 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8RXD5]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.