CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 5
golgi 4
plasma membrane 4
endoplasmic reticulum 4
vacuole 6
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	secretory
iPSORT:	mitochondrion
MultiLoc:	vacuole
Plant-mPloc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

nucleus: 21132161
extracellular: 22945350

msms PMID: 21132161 doi

B Cooper, KB Campbell, J Feng, WM Garrett, R Frederick

Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov

msms PMID: 22945350 doi

C Liao, F Hochholdinger, C Li

Key Laboratory of Plant-Soil Interactions, Ministry of Education, Center for Resources, Environment and Food Security, China Agricultural University, Beijing, China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH13021	Soybean	extracellular	77.34	76.21
KRH44855	Soybean	extracellular	68.47	66.83
KRH27433	Soybean	nucleus	41.38	42.86
KRH27434	Soybean	extracellular	40.89	41.92
VIT_00s0270g00120.t01	Wine grape	extracellular	38.42	40.0
HORVU2Hr1G090750.1	Barley	extracellular	18.72	31.15
GSMUA_Achr1P01860_001	Banana	extracellular	30.05	30.5
Os04t0526600-01	Rice	extracellular	30.05	30.5
TraesCS2B01G392500.1	Wheat	golgi	29.56	29.7
KRH38855	Soybean	extracellular	29.06	29.65
KRH38860	Soybean	extracellular	29.06	29.65
TraesCS2A01G375400.1	Wheat	extracellular, vacuole	29.56	29.56
KRH09377	Soybean	endoplasmic reticulum	29.06	29.35
TraesCS2D01G371800.1	Wheat	extracellular	29.06	29.06
KRH38857	Soybean	extracellular	27.59	28.14
KRH38858	Soybean	extracellular	27.59	28.14
PGSC0003DMT400075938	Potato	extracellular	30.54	27.8
KRH09376	Soybean	extracellular	27.09	27.5
KRH38856	Soybean	extracellular	25.12	27.13
EES12537	Sorghum	vacuole	30.54	26.96
KRH38871	Soybean	mitochondrion	26.11	26.11
KRH09380	Soybean	nucleus	25.62	25.49
KRH38868	Soybean	endoplasmic reticulum	27.09	25.46
KRH38869	Soybean	golgi, plasma membrane, vacuole	26.6	25.35
KRH09379	Soybean	nucleus	26.6	25.23
GSMUA_Achr5P19420_001	Banana	extracellular	27.59	25.23
KRH75892	Soybean	cytosol, extracellular, vacuole	18.72	25.17
KRH38862	Soybean	endoplasmic reticulum	26.11	25.12
KRH38861	Soybean	extracellular	26.11	24.65
KRH75900	Soybean	cytosol	10.84	24.44
Zm00001d002960_P001	Maize	extracellular	18.23	24.34
KRH38863	Soybean	endoplasmic reticulum	25.12	23.72
KRH38870	Soybean	endoplasmic reticulum	23.65	22.97
KXG23922	Sorghum	extracellular	23.65	22.12

Protein Annotations

Gene3D:2.80.10.50	MapMan:35.1	EMBL:ACUP02004969	EnsemblPlantsGene:GLYMA_08G235400	GO:GO:0003674	GO:GO:0004866
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0010951	GO:GO:0019538	GO:GO:0030234
MEROPS:I03.004	UniProt:I1KW54	EnsemblPlants:KRH44856	ProteinID:KRH44856	ProteinID:KRH44856.1	InterPro:Kunitz_inhibitor_STI-like_sf
PFAM:PF00197	PRINTS:PR00291	ScanProsite:PS00283	PANTHER:PTHR33107	PANTHER:PTHR33107:SF4	InterPro:Prot_inh_Kunz-lg
SMART:SM00452	SUPFAM:SSF50386	SignalP:SignalP-noTM	UniParc:UPI00023C5A7F	:	:

Description

hypothetical protein

Coordinates

chr8:+:19780346..19781370

Molecular Weight (calculated)

22907.0 Da

IEP (calculated)

4.212

GRAVY (calculated)

-0.167

Length

203 amino acids

Sequence
(BLAST)

001: MSMKLYASLT LTVWLFMATF SRAQYVIDTN GEPVDNDDEY YIRPAITDNG GRFTLINRNG SCPLYVGLEN TDTPLGYPVK FTHFALNVQD EDIRVNSDLR
101: IEFVEVSTTC VQSTEWRVGE NDTRSGRRLI ITGLDDNFGS IGNYFRIVET QSVGIYNIEW CPMEICSDCG FVCSTGGILR EDGRIFFALD GTPLPVVFQK
201: KDD

Best Arabidopsis Sequence Match ( AT1G73260.1 )
(BLAST)

001: MTKTTKTMNP KFYLVLALTA VLASNAYGAV VDIDGNAMFH ESYYVLPVIR GRGGGLTLAG RGGQPCPYDI VQESSEVDEG IPVKFSNWRL KVAFVPESQN
101: LNIETDVGAT ICIQSTYWRV GEFDHERKQY FVVAGPKPEG FGQDSLKSFF KIEKSGEDAY KFVFCPRTCD SGNPKCSDVG IFIDELGVRR LALSDKPFLV
201: MFKKANVTEV SSKTM

Arabidopsis Description

KTI1Kunitz trypsin inhibitor 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8RXD5]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.