CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 7
plasma membrane 5
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

nucleus: 21132161
extracellular: 22945350

msms PMID: 21132161 doi

B Cooper, KB Campbell, J Feng, WM Garrett, R Frederick

Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov

msms PMID: 22945350 doi

C Liao, F Hochholdinger, C Li

Key Laboratory of Plant-Soil Interactions, Ministry of Education, Center for Resources, Environment and Food Security, China Agricultural University, Beijing, China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH27433	Soybean	nucleus	69.19	69.9
KRH44855	Soybean	extracellular	54.55	51.92
VIT_00s0270g00120.t01	Wine grape	extracellular	45.96	46.67
KRH13021	Soybean	extracellular	48.48	46.6
KRH44856	Soybean	extracellular	41.92	40.89
GSMUA_Achr1P01860_001	Banana	extracellular	35.35	35.0
GSMUA_Achr5P19420_001	Banana	extracellular	35.35	31.53
Os04t0526600-01	Rice	extracellular	28.79	28.5
TraesCS2B01G392500.1	Wheat	golgi	27.78	27.23
PGSC0003DMT400075938	Potato	extracellular	30.3	26.91
KRH38868	Soybean	endoplasmic reticulum	29.29	26.85
TraesCS2A01G375400.1	Wheat	extracellular, vacuole	27.27	26.6
Zm00001d002960_P001	Maize	extracellular	20.2	26.32
TraesCS2D01G371800.1	Wheat	extracellular	26.77	26.11
EES12537	Sorghum	vacuole	29.8	25.65
KRH09377	Soybean	endoplasmic reticulum	25.76	25.37
KRH38855	Soybean	extracellular	25.25	25.13
KRH38860	Soybean	extracellular	25.25	25.13
KRH38862	Soybean	endoplasmic reticulum	26.77	25.12
KRH09379	Soybean	nucleus	26.77	24.77
KRH38871	Soybean	mitochondrion	25.25	24.63
KRH38857	Soybean	extracellular	24.75	24.62
KRH38858	Soybean	extracellular	24.75	24.62
KRH75892	Soybean	cytosol, extracellular, vacuole	18.69	24.5
KRH38863	Soybean	endoplasmic reticulum	26.26	24.19
KRH09376	Soybean	extracellular	24.24	24.0
KRH38861	Soybean	extracellular	25.76	23.72
KRH09380	Soybean	nucleus	24.24	23.53
KRH75900	Soybean	cytosol	10.61	23.33
HORVU2Hr1G090750.1	Barley	extracellular	14.14	22.95
KRH38869	Soybean	golgi, plasma membrane, vacuole	24.24	22.54
KRH38870	Soybean	endoplasmic reticulum	23.23	22.01
KRH38856	Soybean	extracellular	20.2	21.28
KXG23922	Sorghum	extracellular	21.21	19.35

Protein Annotations

Gene3D:2.80.10.50	MapMan:35.1	EMBL:ACUP02007805	EnsemblPlantsGene:GLYMA_12G234800	GO:GO:0003674	GO:GO:0004866
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0010951	GO:GO:0019538	GO:GO:0030234
MEROPS:I03.004	UniProt:I1LVB1	EnsemblPlants:KRH27434	ProteinID:KRH27434	ProteinID:KRH27434.1	InterPro:Kunitz_inhibitor_STI-like_sf
PFAM:PF00197	PRINTS:PR00291	PANTHER:PTHR33107	PANTHER:PTHR33107:SF4	InterPro:Prot_inh_Kunz-lg	SMART:SM00452
SUPFAM:SSF50386	SignalP:SignalP-noTM	UniParc:UPI00023D14D0	:	:	:

Description

hypothetical protein

Coordinates

chr12:+:39414426..39415414

Molecular Weight (calculated)

21626.8 Da

IEP (calculated)

4.580

GRAVY (calculated)

-0.059

Length

198 amino acids

Sequence
(BLAST)

001: MSMRSIGTSL SLMVWLVIAT SALAKSDNPP VLDTQGNPLE PGKDYYIKPA ITDVGGRVTL LSRNNPCPLY VGQENSDAAE GLPLFFTPFA EEDDVVKVNR
101: DFKVTFSAAS ICVQGTNWNL AEKDSESGRR LIAASGRDDY FRITETPIKG SYYIGWCPTD VCPFCRFDCG IVGGLRENGK ILLALDGNVL PVVFEKAY

Best Arabidopsis Sequence Match ( AT3G04320.1 )
(BLAST)

001: MKTFQLMMIS FLFVAITTTS GVVSEGNDVV YDGEGDPVKP NVPYYISFMT SDYNMWICRM QYGSTDPNSC PQQPLMVTHP NLAAPTPVMF VLANKSDVVR
101: ESAKLKIKFV GPRQCGKSGF WKVVQRNSSE GEVFLNGSKS MSHNDSTFAI HKTNEYYKFT FGDGDYPTTI SMTNDYPIYR LLSKRLSGEM EIYFYKNLTT
201: SEG

Arabidopsis Description

Kunitz family trypsin and protease inhibitor protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LR55]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.