CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

extracellular 8
endoplasmic reticulum 5
vacuole 7
plasma membrane 5
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	secretory
BaCelLo:	secretory
EpiLoc:	extracellular
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

endoplasmic reticulum: 23041469
endoplasmic reticulum: 27224218

msms PMID: 23041469 doi

S Komatsu, R Kuji, Y Nanjo, S Hiraga, K Furukawa

National Institute of Crop Science, Tsukuba 305-8518, Japan. skomatsu@affrc.go.jp

msms PMID: 27224218 doi

X Wang, S Komatsu

Graduate School of Life and Environmental Sciences, University of Tsukuba , Tsukuba 305-8572, Japan., National Institute of Crop Science, National Agriculture and Food Research Organization , Tsukuba 305-8518, Japan.

PPI

Inferred distinct locusB in Crop

locusB	locations
KRH11076
KRH21197
KRH42923
KRH42926
KRH45251
KRH59035
KRH59036

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G17860.1	KRH11076	AT4G19030.1	21798944
AT1G17860.1	KRH21197	AT4G19030.1	21798944
AT1G17860.1	KRH42923	AT4G19030.1	21798944
AT1G17860.1	KRH42926	AT4G19030.1	21798944
AT1G17860.1	KRH45251	AT4G19030.1	21798944
AT1G17860.1	KRH59035	AT4G19030.1	21798944
AT1G17860.1	KRH59036	AT4G19030.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH38863	Soybean	endoplasmic reticulum	60.77	59.07
KRH38862	Soybean	endoplasmic reticulum	58.85	58.29
KRH09376	Soybean	extracellular	51.67	54.0
KRH38860	Soybean	extracellular	51.2	53.77
KRH38856	Soybean	extracellular	48.33	53.72
KRH09379	Soybean	nucleus	54.55	53.27
KRH38855	Soybean	extracellular	50.72	53.27
KRH38857	Soybean	extracellular	50.72	53.27
KRH38858	Soybean	extracellular	49.76	52.26
KRH38861	Soybean	extracellular	52.63	51.16
KRH75900	Soybean	cytosol	21.05	48.89
KRH38868	Soybean	endoplasmic reticulum	50.24	48.61
KRH38869	Soybean	golgi, plasma membrane, vacuole	49.28	48.36
KRH09377	Soybean	endoplasmic reticulum	45.45	47.26
CDX96746	Canola	extracellular	41.15	44.1
KRH09380	Soybean	nucleus	42.58	43.63
Bra016580.1-P	Field mustard	extracellular	40.67	43.59
Bra025942.1-P	Field mustard	extracellular	39.23	42.71
CDY26209	Canola	extracellular	39.23	42.71
CDX83886	Canola	extracellular	39.71	42.56
CDY19181	Canola	extracellular	38.76	42.19
KRH75892	Soybean	cytosol, extracellular, vacuole	30.14	41.72
AT1G17860.1	Thale cress	extracellular	38.28	40.82
KRH38871	Soybean	mitochondrion	38.76	39.9
Solyc03g098670.1.1	Tomato	extracellular	35.89	37.31
PGSC0003DMT400026293	Potato	vacuole	36.36	36.54
GSMUA_Achr5P19420_001	Banana	extracellular	37.8	35.59
GSMUA_Achr1P01860_001	Banana	extracellular	33.49	35.0
HORVU2Hr1G090750.1	Barley	extracellular	20.1	34.43
TraesCS2A01G375400.1	Wheat	extracellular, vacuole	31.1	32.02
Os04t0526600-01	Rice	extracellular	30.62	32.0
TraesCS2D01G371800.1	Wheat	extracellular	30.62	31.53
TraesCS2B01G392500.1	Wheat	golgi	29.67	30.69
Zm00001d002960_P001	Maize	extracellular	22.01	30.26
PGSC0003DMT400026262	Potato	vacuole	32.06	27.35
Solyc03g098730.1.1	Tomato	nucleus	31.1	26.42
KRH27433	Soybean	nucleus	22.49	23.98
EES12537	Sorghum	vacuole	26.32	23.91
KRH44856	Soybean	extracellular	22.97	23.65
KRH44855	Soybean	extracellular	23.45	23.56
KRH27434	Soybean	extracellular	22.01	23.23
KXG23922	Sorghum	extracellular	23.92	23.04
KRH13021	Soybean	extracellular	21.05	21.36
VIT_00s0207g00030.t01	Wine grape	extracellular, nucleus	0.0	0.0

Protein Annotations

EntrezGene:100790688	Gene3D:2.80.10.50	MapMan:35.1	EMBL:ACUP02005885	EMBL:BT098656	UniProt:C6TLR5
EnsemblPlantsGene:GLYMA_09G163800	GO:GO:0003674	GO:GO:0004866	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0010951	GO:GO:0019538	GO:GO:0030234	MEROPS:I03.030	EnsemblPlants:KRH38870	ProteinID:KRH38870
ProteinID:KRH38870.1	InterPro:Kunitz_inhibitor_STI-like_sf	PFAM:PF00197	PANTHER:PTHR33107	PANTHER:PTHR33107:SF9	InterPro:Prot_inh_Kunz-lg
SMART:SM00452	SUPFAM:SSF50386	SignalP:SignalP-noTM	UniParc:UPI0001B170DD	SEG:seg	:

Description

hypothetical protein

Coordinates

chr9:-:38812168..38813121

Molecular Weight (calculated)

23114.3 Da

IEP (calculated)

10.053

GRAVY (calculated)

-0.031

Length

209 amino acids

Sequence
(BLAST)

001: MKSTMLLAFA LVLALSSQPL LGGAEASPEQ VVDTLGKKLR VGTNYYIVPS LPYTKIRTTR GLGLASVGKP YCPLDVVVVN GYHGLPVTFS PVNPKKGVIR
101: VSTDLNIKFS ARTSCPRQYS TVWKLDDFDF SKRQWFVTTG GVVGNPSLET IHNWFKIEKY DGAYKLVYCP SVVKCPKHLC KNVGLFVDEK GNKRLALTDV
201: PLKVQFQQA

Best Arabidopsis Sequence Match ( AT1G17860.1 )
(BLAST)

001: MSSLLYIFLL LAVFISHRGV TTEAAVEPVK DINGKSLLTG VNYYILPVIR GRGGGLTMSN LKTETCPTSV IQDQFEVSQG LPVKFSPYDK SRTIPVSTDV
101: NIKFSPTSIW ELANFDETTK QWFISTCGVE GNPGQKTVDN WFKIDKFEKD YKIRFCPTVC NFCKVICRDV GVFVQDGKRR LALSDVPLKV MFKRAY

Arabidopsis Description

KTI2Kunitz trypsin inhibitor 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LMU2]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.