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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 8
  • endoplasmic reticulum 5
  • vacuole 7
  • plasma membrane 5
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:secretory
BaCelLo:secretory
EpiLoc:extracellular
iPSORT:secretory
MultiLoc:vacuole
Plant-mPloc:vacuole
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:extracellular
YLoc:extracellular
extracellular: 26583031
msms PMID: 26583031 doi
F Gawehns, L Ma, O Bruning, PM Houterman, S Boeren, BJ Cornelissen, M Rep, FL Takken
Laboratory of Biochemistry, Wageningen University Wageningen, Netherlands., Molecular Plant Pathology, Faculty of Science, Swammerdam Institute for Life Sciences, University of Amsterdam Amsterdam, Netherlands., RNA Biology and Applied Bioinformatics Research Group and MAD: Dutch Genomics Service and Support Provider, Faculty of Science, Swammerdam Institute for Life Sciences, University of Amsterdam Amsterdam, Netherlands.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400026293 Potato vacuole 83.58 80.77
Solyc03g020010.1.1 Tomato extracellular 42.29 41.46
Solyc03g098730.1.1 Tomato nucleus 50.25 41.06
KRH38860 Soybean extracellular 39.3 39.7
KRH38857 Soybean extracellular 39.3 39.7
KRH38855 Soybean extracellular 39.3 39.7
KRH38858 Soybean extracellular 38.81 39.2
GSMUA_Achr1P01860_001 Banana extracellular 38.31 38.5
KRH09376 Soybean extracellular 38.31 38.5
KRH38862 Soybean endoplasmic reticulum 39.8 37.91
KRH38856 Soybean extracellular 34.83 37.23
KRH09377 Soybean endoplasmic reticulum 36.82 36.82
Solyc03g098740.1.1 Tomato extracellular 36.32 36.68
Solyc06g072230.1.1 Tomato extracellular 36.32 36.5
KRH38870 Soybean endoplasmic reticulum 37.31 35.89
KRH38863 Soybean endoplasmic reticulum 38.31 35.81
KRH09380 Soybean nucleus 36.32 35.78
KRH75900 Soybean cytosol 15.92 35.56
KRH38869 Soybean golgi, plasma membrane, vacuole 37.31 35.21
KRH09379 Soybean nucleus 35.82 33.64
KRH38871 Soybean mitochondrion 33.83 33.5
KRH38861 Soybean extracellular 35.32 33.02
GSMUA_Achr5P19420_001 Banana extracellular 36.32 32.88
Solyc06g072220.1.1 Tomato extracellular 34.33 32.7
KRH38868 Soybean endoplasmic reticulum 34.83 32.41
Solyc06g072210.1.1 Tomato extracellular 29.35 30.41
TraesCS2B01G392500.1 Wheat golgi 30.35 30.2
KRH75892 Soybean cytosol, extracellular, vacuole 22.39 29.8
HORVU2Hr1G090750.1 Barley extracellular 17.91 29.51
TraesCS2D01G371800.1 Wheat extracellular 28.86 28.57
TraesCS2A01G375400.1 Wheat extracellular, vacuole 28.86 28.57
Os04t0526600-01 Rice extracellular 28.36 28.5
Solyc03g098710.1.1 Tomato extracellular 28.86 25.89
Solyc11g022590.1.1 Tomato extracellular 27.86 24.89
KXG23922 Sorghum extracellular 26.87 24.88
Zm00001d002960_P001 Maize extracellular 16.42 21.71
EES12537 Sorghum vacuole 24.38 21.3
VIT_00s0207g00030.t01 Wine grape extracellular, nucleus 0.5 0.08
Protein Annotations
Gene3D:2.80.10.50MapMan:35.1GO:GO:0003674GO:GO:0004866GO:GO:0008150GO:GO:0008152
GO:GO:0009987GO:GO:0010951GO:GO:0019538GO:GO:0030234MEROPS:I03.030UniProt:K4BJT0
InterPro:Kunitz_inhibitor_STI-like_sfPFAM:PF00197PRINTS:PR00291PANTHER:PTHR33107PANTHER:PTHR33107:SF5InterPro:Prot_inh_Kunz-lg
SMART:SM00452SUPFAM:SSF50386SignalP:SignalP-noTMEnsemblPlantsGene:Solyc03g098670.1EnsemblPlants:Solyc03g098670.1.1UniParc:UPI0002768B19
Description
No Description!
Coordinates
chr3:-:60963114..60963719
Molecular Weight (calculated)
22069.6 Da
IEP (calculated)
5.297
GRAVY (calculated)
0.041
Length
201 amino acids
Sequence
(BLAST)
001: MKAVPFLLVA LLSTIFFLVN AQDVAEPILD VSGNAVRTGV NYYILPAGRG NGGGLQVASI KNRTNPLVVS QNVDDSVIGV NVQFSPVDPK ENTIRLSTDM
101: NVKFTSMEIS DSSTVWRINT ELIPQRYLVT IGGVEGNPGR ETLGNWFNID KYEDAYKLVY CPVVCETCRP FCGEIGILEE SGKRVLFVGR DPPLKVTFHK
201: A
Best Arabidopsis Sequence Match ( AT1G17860.1 )
(BLAST)
001: MSSLLYIFLL LAVFISHRGV TTEAAVEPVK DINGKSLLTG VNYYILPVIR GRGGGLTMSN LKTETCPTSV IQDQFEVSQG LPVKFSPYDK SRTIPVSTDV
101: NIKFSPTSIW ELANFDETTK QWFISTCGVE GNPGQKTVDN WFKIDKFEKD YKIRFCPTVC NFCKVICRDV GVFVQDGKRR LALSDVPLKV MFKRAY
Arabidopsis Description
KTI2Kunitz trypsin inhibitor 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LMU2]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.