Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 4
- vacuole 6
- plasma membrane 4
- golgi 4
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
extracellular:
22364583
extracellular: 22892874 nucleus: 28394025 extracellular: 29876421 |
msms PMID:
28394025
doi
Cell and Molecular Sciences, JHI, Invergowrie, Dundee, DD2 5DA, UK., Division of Plant Science, School of Life Sciences, University of Dundee at the James Hutton Institute (JHI), Invergowrie, Dundee, DD2 5DA, UK., Dundee Effector Consortium, JHI, Invergowrie, Dundee, DD2 5DA, UK., Section of Population Genetics, Technische Universität München, 85354, Freising, Germany., Wellcome Trust Centre for Gene Regulation and Expression, School of Life Sciences, University of Dundee, Dow Street, Dundee, DD1 5EH, UK.
msms PMID:
22892874
doi
Unité de Génétique et Amélioration des Fruits et Légumes, INRA, BP 94, 84143 Montfavet, France. ehkonozy@yahoo.com
msms PMID:
29876421
doi
Cryobiofrontier Research Center, Faculty of Agriculture, Iwate University, Morioka 020-8550, Japan., Plant Stress Physiology Group, Plant Nutrition Department, Aula Dei Experimental Station, CSIC, P.O. Box 13034, 50080 Zaragoza, Spain., United Graduate School of Agricultural Sciences, Iwate University, Morioka 020-8550, Japan., USDA-ARS Children's Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, 1100 Bates St., Houston, TX 77030, USA.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400026261 | Potato | extracellular | 94.97 | 95.45 |
| Solyc03g098670.1.1 | Tomato | extracellular | 36.68 | 36.32 |
| Solyc03g020010.1.1 | Tomato | extracellular | 35.68 | 34.63 |
| GSMUA_Achr1P01860_001 | Banana | extracellular | 31.66 | 31.5 |
| Solyc06g072230.1.1 | Tomato | extracellular | 31.66 | 31.5 |
| GSMUA_Achr5P19420_001 | Banana | extracellular | 34.17 | 30.63 |
| TraesCS2B01G392500.1 | Wheat | golgi | 29.65 | 29.21 |
| TraesCS2A01G375400.1 | Wheat | extracellular, vacuole | 29.65 | 29.06 |
| Os04t0526600-01 | Rice | extracellular | 28.64 | 28.5 |
| TraesCS2D01G371800.1 | Wheat | extracellular | 27.64 | 27.09 |
| Solyc06g072220.1.1 | Tomato | extracellular | 28.64 | 27.01 |
| HORVU2Hr1G090750.1 | Barley | extracellular | 15.58 | 25.41 |
| Solyc11g022590.1.1 | Tomato | extracellular | 28.64 | 25.33 |
| Solyc06g072210.1.1 | Tomato | extracellular | 24.12 | 24.74 |
| Zm00001d002960_P001 | Maize | extracellular | 18.09 | 23.68 |
| Solyc03g098710.1.1 | Tomato | extracellular | 26.63 | 23.66 |
| KXG23922 | Sorghum | extracellular | 25.63 | 23.5 |
| Solyc03g098730.1.1 | Tomato | nucleus | 26.63 | 21.54 |
| EES12537 | Sorghum | vacuole | 23.62 | 20.43 |
Protein Annotations
| Gene3D:2.80.10.50 | MapMan:35.2 | GO:GO:0003674 | GO:GO:0004866 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009987 | GO:GO:0010951 | GO:GO:0019538 | GO:GO:0030234 | MEROPS:I03.030 | UniProt:K4BJT7 |
| InterPro:Kunitz_inhibitor_STI-like_sf | PFAM:PF00197 | PRINTS:PR00291 | PANTHER:PTHR33107 | PANTHER:PTHR33107:SF5 | InterPro:Prot_inh_Kunz-lg |
| SMART:SM00452 | SUPFAM:SSF50386 | SignalP:SignalP-noTM | EnsemblPlantsGene:Solyc03g098740.1 | EnsemblPlants:Solyc03g098740.1.1 | UniParc:UPI0002768B20 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr3:-:61011692..61012291
Molecular Weight (calculated)
21630.1 Da
IEP (calculated)
8.258
GRAVY (calculated)
0.122
Length
199 amino acids
Sequence
(BLAST)
(BLAST)
001: MKILLLSCFL YFTLFQTIKS EPVLDTNNEQ VRPGYTYYIL PAASAGSGGG LTLAKGENGS CPLDVFQARN SQSLGIPLKF LMVNSSAGLV IDENEDINIK
101: FAAQRYVSIC NVSTVWKIED GIVTTGGIKG GSENGTSTSL FTIQKYEDAY ALQYCPRATG CSFICPRLLC GYIGILTAEN GSRHLAVNRP VFKIVFRKA
101: FAAQRYVSIC NVSTVWKIED GIVTTGGIKG GSENGTSTSL FTIQKYEDAY ALQYCPRATG CSFICPRLLC GYIGILTAEN GSRHLAVNRP VFKIVFRKA
001: MKATISITTI FLVVALAAPS LARPDNHVED SVGRLLRPGQ TYHIVPANPE TGGGIFSNSE EICPLDIFQS NNPLDLGLPI KFKSELWFVK EMNSITIEFE
101: APNWFLCPKE SKGWRVVYSE EFKKSLIIST GGSSNPSGFQ IHRVDGGAYK IVYCTNISTT TCMNVGIFTD ISGARRLALT SDEALLVKFQ KAATPKADLK
201: TKLRMFPFY
101: APNWFLCPKE SKGWRVVYSE EFKKSLIIST GGSSNPSGFQ IHRVDGGAYK IVYCTNISTT TCMNVGIFTD ISGARRLALT SDEALLVKFQ KAATPKADLK
201: TKLRMFPFY
Arabidopsis Description
ATDR4Dr4 protein [Source:UniProtKB/TrEMBL;Acc:Q39091]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.