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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 7
  • endoplasmic reticulum 5
  • vacuole 7
  • plasma membrane 5
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:vacuole
Plant-mPloc:vacuole
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:extracellular
YLoc:extracellular
extracellular: 26583031
msms PMID: 26583031 doi
F Gawehns, L Ma, O Bruning, PM Houterman, S Boeren, BJ Cornelissen, M Rep, FL Takken
Laboratory of Biochemistry, Wageningen University Wageningen, Netherlands., Molecular Plant Pathology, Faculty of Science, Swammerdam Institute for Life Sciences, University of Amsterdam Amsterdam, Netherlands., RNA Biology and Applied Bioinformatics Research Group and MAD: Dutch Genomics Service and Support Provider, Faculty of Science, Swammerdam Institute for Life Sciences, University of Amsterdam Amsterdam, Netherlands.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400026271 Potato vacuole 65.62 64.76
PGSC0003DMT400026286 Potato extracellular, vacuole 60.27 59.73
PGSC0003DMT400026280 Potato extracellular 58.93 59.19
Solyc06g072230.1.1 Tomato extracellular 31.25 35.0
Solyc03g020010.1.1 Tomato extracellular 29.02 31.71
Solyc06g072220.1.1 Tomato extracellular 29.46 31.28
Solyc03g098670.1.1 Tomato extracellular 25.89 28.86
GSMUA_Achr5P19420_001 Banana extracellular 27.68 27.93
GSMUA_Achr1P01860_001 Banana extracellular 24.55 27.5
Solyc03g098740.1.1 Tomato extracellular 23.66 26.63
Os04t0526600-01 Rice extracellular 23.66 26.5
HORVU2Hr1G090750.1 Barley extracellular 14.29 26.23
Solyc06g072210.1.1 Tomato extracellular 21.88 25.26
TraesCS2A01G375400.1 Wheat extracellular, vacuole 22.77 25.12
TraesCS2B01G392500.1 Wheat golgi 22.32 24.75
Solyc11g022590.1.1 Tomato extracellular 24.11 24.0
TraesCS2D01G371800.1 Wheat extracellular 21.43 23.65
KXG23922 Sorghum extracellular 20.98 21.66
EES12537 Sorghum vacuole 21.43 20.87
Solyc03g098730.1.1 Tomato nucleus 22.32 20.33
Zm00001d002960_P001 Maize extracellular 13.39 19.74
Protein Annotations
Gene3D:2.80.10.50MapMan:35.2GO:GO:0003674GO:GO:0004866GO:GO:0008150GO:GO:0008152
GO:GO:0009987GO:GO:0010951GO:GO:0019538GO:GO:0030234MEROPS:I03.030UniProt:K4BJT4
InterPro:Kunitz_inhibitor_STI-like_sfPFAM:PF00197ScanProsite:PS00283PANTHER:PTHR33107PANTHER:PTHR33107:SF5InterPro:Prot_inh_Kunz-lg
SMART:SM00452SUPFAM:SSF50386SignalP:SignalP-noTMEnsemblPlantsGene:Solyc03g098710.1EnsemblPlants:Solyc03g098710.1.1UniParc:UPI0002768B1D
SEG:seg:::::
Description
No Description!
Coordinates
chr3:-:60989342..60990016
Molecular Weight (calculated)
24727.4 Da
IEP (calculated)
7.000
GRAVY (calculated)
-0.055
Length
224 amino acids
Sequence
(BLAST)
001: MNILSFLLLS TTLSLVAFSI SDTNVNVIST PVLDREGKSL KINEEYVINS IAVGGGSVYL DNIKNRTQCP NDVLHDSSGS FYNSTAVLFY TMQLGSLFVS
101: ENQDVSIMFS TSSVSKSCVN ETVWQAGDYM LGPIHPPPRF VITGATLGFP GPNNIKNWFK IVKHETGRPH SYKLRYCPSK FICPTCQVDC ADVGLYKDSG
201: RTRLVLNDET YAFGFSKVNN HLDA
Best Arabidopsis Sequence Match ( AT1G17860.1 )
(BLAST)
001: MSSLLYIFLL LAVFISHRGV TTEAAVEPVK DINGKSLLTG VNYYILPVIR GRGGGLTMSN LKTETCPTSV IQDQFEVSQG LPVKFSPYDK SRTIPVSTDV
101: NIKFSPTSIW ELANFDETTK QWFISTCGVE GNPGQKTVDN WFKIDKFEKD YKIRFCPTVC NFCKVICRDV GVFVQDGKRR LALSDVPLKV MFKRAY
Arabidopsis Description
KTI2Kunitz trypsin inhibitor 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LMU2]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.