Factsheet for PGSC0003DMT400026280

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
golgi 5
plasma membrane 5
endoplasmic reticulum 5
vacuole 7

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400026286	Potato	extracellular, vacuole	69.51	68.58
PGSC0003DMT400026271	Potato	vacuole	68.61	67.4
Solyc03g098710.1.1	Tomato	extracellular	59.19	58.93
PGSC0003DMT400069586	Potato	extracellular	31.84	35.15
PGSC0003DMT400069587	Potato	vacuole	31.39	33.33
PGSC0003DMT400069321	Potato	extracellular	24.66	32.74
PGSC0003DMT400039353	Potato	extracellular	30.04	32.68
PGSC0003DMT400069588	Potato	extracellular	29.6	32.35
GSMUA_Achr1P01860_001	Banana	extracellular	28.7	32.0
GSMUA_Achr5P19420_001	Banana	extracellular	30.04	30.18
PGSC0003DMT400039535	Potato	extracellular	27.35	29.33
PGSC0003DMT400026261	Potato	extracellular	26.01	29.29
TraesCS2A01G375400.1	Wheat	extracellular, vacuole	26.01	28.57
Os04t0526600-01	Rice	extracellular	25.56	28.5
TraesCS2D01G371800.1	Wheat	extracellular	25.56	28.08
HORVU2Hr1G090750.1	Barley	extracellular	15.25	27.87
PGSC0003DMT400075938	Potato	extracellular	27.8	27.8
TraesCS2B01G392500.1	Wheat	golgi	24.66	27.23
PGSC0003DMT400026293	Potato	vacuole	25.11	26.92
PGSC0003DMT400035621	Potato	extracellular	26.46	26.22
PGSC0003DMT400069324	Potato	extracellular	22.42	25.77
Zm00001d002960_P001	Maize	extracellular	16.14	23.68
EES12537	Sorghum	vacuole	22.87	22.17
KXG23922	Sorghum	extracellular	21.52	22.12
PGSC0003DMT400026262	Potato	vacuole	23.32	21.22

Protein Annotations

EntrezGene:102594910	Gene3D:2.80.10.50	MapMan:35.1	GO:GO:0003674	GO:GO:0004866	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0010951	GO:GO:0019538	GO:GO:0030234	MEROPS:I03.030
InterPro:Kunitz_inhibitor_STI-like_sf	UniProt:M1AMY6	PFAM:PF00197	EnsemblPlantsGene:PGSC0003DMG400010141	PGSC:PGSC0003DMG400010141	EnsemblPlants:PGSC0003DMT400026280
PRINTS:PR00291	ScanProsite:PS00283	PANTHER:PTHR33107	PANTHER:PTHR33107:SF5	InterPro:Prot_inh_Kunz-lg	SMART:SM00452
SUPFAM:SSF50386	SignalP:SignalP-noTM	UniParc:UPI000296F71B	RefSeq:XP_006353924.2	SEG:seg	:

Description

Stigma expressed protein [Source:PGSC_GENE;Acc:PGSC0003DMG400010141]

Coordinates

chr3:+:44221914..44222585

Molecular Weight (calculated)

24723.3 Da

IEP (calculated)

5.622

GRAVY (calculated)

-0.216

Length

223 amino acids

Sequence
(BLAST)

001: MKSISNILSF LLVSSSLSLV SFSQSFTSDN NPVLDMDGEP LKINEEYSIL SIPYGGGSVY LADLGNTKCP NGIVQDSSGE FDHNTPVTFF TMQLGSHYVF
101: ENQDVSIMFS TTTSNLCVNE TVWKAGDYML GPVHPPPRFV ITGGTLGIPG PNTLKNWFKI EKYETGRPHS YKLRYCPSQF MCPTCQFDCA DVGLYENKGY
201: ARLALNNKPY PFGFTKVNKN IDA

Best Arabidopsis Sequence Match ( AT1G73260.1 )
(BLAST)

001: MTKTTKTMNP KFYLVLALTA VLASNAYGAV VDIDGNAMFH ESYYVLPVIR GRGGGLTLAG RGGQPCPYDI VQESSEVDEG IPVKFSNWRL KVAFVPESQN
101: LNIETDVGAT ICIQSTYWRV GEFDHERKQY FVVAGPKPEG FGQDSLKSFF KIEKSGEDAY KFVFCPRTCD SGNPKCSDVG IFIDELGVRR LALSDKPFLV
201: MFKKANVTEV SSKTM

Arabidopsis Description

KTI1Kunitz trypsin inhibitor 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8RXD5]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.