Factsheet for PGSC0003DMT400026286

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, vacuole

Predictor Summary:

extracellular 4
endoplasmic reticulum 3
vacuole 5
plasma membrane 3
golgi 3
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, vacuole
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	secretory
iPSORT:	plastid
MultiLoc:	vacuole
Plant-mPloc:	vacuole
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400026271	Potato	vacuole	75.22	74.89
PGSC0003DMT400026280	Potato	extracellular	68.58	69.51
Solyc03g098710.1.1	Tomato	extracellular	59.73	60.27
PGSC0003DMT400069321	Potato	extracellular	25.22	33.93
PGSC0003DMT400069586	Potato	extracellular	29.65	33.17
PGSC0003DMT400069587	Potato	vacuole	29.65	31.9
GSMUA_Achr1P01860_001	Banana	extracellular	26.99	30.5
PGSC0003DMT400039353	Potato	extracellular	27.43	30.24
PGSC0003DMT400069588	Potato	extracellular	26.99	29.9
PGSC0003DMT400026261	Potato	extracellular	25.22	28.79
GSMUA_Achr5P19420_001	Banana	extracellular	27.88	28.38
HORVU2Hr1G090750.1	Barley	extracellular	15.04	27.87
PGSC0003DMT400026293	Potato	vacuole	25.22	27.4
PGSC0003DMT400039535	Potato	extracellular	25.22	27.4
PGSC0003DMT400075938	Potato	extracellular	26.11	26.46
TraesCS2A01G375400.1	Wheat	extracellular, vacuole	23.45	26.11
TraesCS2D01G371800.1	Wheat	extracellular	23.01	25.62
Os04t0526600-01	Rice	extracellular	22.57	25.5
PGSC0003DMT400035621	Potato	extracellular	25.22	25.33
PGSC0003DMT400069324	Potato	extracellular	21.68	25.26
TraesCS2B01G392500.1	Wheat	golgi	22.12	24.75
KXG23922	Sorghum	extracellular	21.68	22.58
EES12537	Sorghum	vacuole	22.57	22.17
PGSC0003DMT400026262	Potato	vacuole	22.57	20.82
Zm00001d002960_P001	Maize	extracellular	13.72	20.39

Protein Annotations

EntrezGene:107061746	Gene3D:2.80.10.50	MapMan:35.1	GO:GO:0003674	GO:GO:0004866	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0010951	GO:GO:0019538	GO:GO:0030234	MEROPS:I03.030
InterPro:Kunitz_inhibitor_STI-like_sf	UniProt:M1AMY8	PFAM:PF00197	EnsemblPlantsGene:PGSC0003DMG400010144	PGSC:PGSC0003DMG400010144	EnsemblPlants:PGSC0003DMT400026286
ScanProsite:PS00283	PANTHER:PTHR33107	PANTHER:PTHR33107:SF5	InterPro:Prot_inh_Kunz-lg	SMART:SM00452	SUPFAM:SSF50386
UniParc:UPI000294CF38	RefSeq:XP_015167015.1	SEG:seg	:	:	:

Description

Stigma expressed protein [Source:PGSC_GENE;Acc:PGSC0003DMG400010144]

Coordinates

chr3:+:44319220..44319900

Molecular Weight (calculated)

25471.1 Da

IEP (calculated)

5.036

GRAVY (calculated)

-0.295

Length

226 amino acids

Sequence
(BLAST)

001: MKKSISNILV SSLVAFSHEF SISDNNGNIV FPHVLDMDGE PLKINEEYSI LSVLPGGGSV YLADIDNLTE CPNDVVKDRS GDFDHSTPVL FYTMQLGRDH
101: FVYENQDVSI MFSTSSSTKS CFNETVWKAG YYFLGPVHPP PRFVITGGTL GIPGPNTLNN WFKIEKYETE SPHSYKLRYC PSQYMCPTCQ FDCADVGLYK
201: DMEYTRLALN NMPYPFGFSK VKKNDA

Best Arabidopsis Sequence Match ( AT1G17860.1 )
(BLAST)

001: MSSLLYIFLL LAVFISHRGV TTEAAVEPVK DINGKSLLTG VNYYILPVIR GRGGGLTMSN LKTETCPTSV IQDQFEVSQG LPVKFSPYDK SRTIPVSTDV
101: NIKFSPTSIW ELANFDETTK QWFISTCGVE GNPGQKTVDN WFKIDKFEKD YKIRFCPTVC NFCKVICRDV GVFVQDGKRR LALSDVPLKV MFKRAY

Arabidopsis Description

KTI2Kunitz trypsin inhibitor 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LMU2]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.