Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 8
- endoplasmic reticulum 5
- vacuole 7
- plasma membrane 5
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400069588 | Potato | extracellular | 63.69 | 52.45 |
| PGSC0003DMT400069324 | Potato | extracellular | 57.14 | 49.48 |
| VIT_17s0119g00150.t01 | Wine grape | extracellular | 48.21 | 39.9 |
| VIT_17s0119g00120.t01 | Wine grape | extracellular | 48.21 | 39.51 |
| PGSC0003DMT400039535 | Potato | extracellular | 47.62 | 38.46 |
| VIT_17s0119g00280.t01 | Wine grape | extracellular | 45.83 | 37.93 |
| PGSC0003DMT400039353 | Potato | extracellular | 45.83 | 37.56 |
| PGSC0003DMT400069586 | Potato | extracellular | 42.26 | 35.15 |
| PGSC0003DMT400069587 | Potato | vacuole | 42.26 | 33.81 |
| GSMUA_Achr1P01860_001 | Banana | extracellular | 37.5 | 31.5 |
| VIT_17s0119g00180.t01 | Wine grape | cytosol | 21.43 | 30.25 |
| PGSC0003DMT400026293 | Potato | vacuole | 36.9 | 29.81 |
| GSMUA_Achr5P19420_001 | Banana | extracellular | 39.29 | 29.73 |
| VIT_17s0119g00220.t01 | Wine grape | cytosol | 20.83 | 29.41 |
| PGSC0003DMT400075938 | Potato | extracellular | 38.69 | 29.15 |
| VIT_17s0119g00160.t01 | Wine grape | cytosol, plastid, vacuole | 23.21 | 29.1 |
| VIT_17s0119g00240.t01 | Wine grape | cytosol, extracellular, vacuole | 42.26 | 27.31 |
| PGSC0003DMT400026271 | Potato | vacuole | 35.71 | 26.43 |
| PGSC0003DMT400026262 | Potato | vacuole | 36.9 | 25.31 |
| PGSC0003DMT400026286 | Potato | extracellular, vacuole | 33.93 | 25.22 |
| PGSC0003DMT400026280 | Potato | extracellular | 32.74 | 24.66 |
| Os04t0526600-01 | Rice | extracellular | 29.17 | 24.5 |
| PGSC0003DMT400035621 | Potato | extracellular | 31.55 | 23.56 |
| PGSC0003DMT400026261 | Potato | extracellular | 27.38 | 23.23 |
| TraesCS2B01G392500.1 | Wheat | golgi | 25.6 | 21.29 |
| TraesCS2A01G375400.1 | Wheat | extracellular, vacuole | 25.0 | 20.69 |
| HORVU2Hr1G090750.1 | Barley | extracellular | 14.88 | 20.49 |
| TraesCS2D01G371800.1 | Wheat | extracellular | 23.21 | 19.21 |
| Zm00001d002960_P001 | Maize | extracellular | 16.67 | 18.42 |
| KXG23922 | Sorghum | extracellular | 23.21 | 17.97 |
| EES12537 | Sorghum | vacuole | 23.81 | 17.39 |
| VIT_17s0119g00230.t01 | Wine grape | nucleus, vacuole | 38.1 | 3.05 |
Protein Annotations
| EntrezGene:107060642 | Gene3D:2.80.10.50 | MapMan:35.1 | GO:GO:0003674 | GO:GO:0004866 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009987 | GO:GO:0010951 | GO:GO:0019538 | GO:GO:0030234 | MEROPS:I03.030 |
| InterPro:Kunitz_inhibitor_STI-like_sf | UniProt:M1CKA4 | PFAM:PF00197 | EnsemblPlantsGene:PGSC0003DMG400026966 | PGSC:PGSC0003DMG400026966 | EnsemblPlants:PGSC0003DMT400069321 |
| ScanProsite:PS00283 | PANTHER:PTHR33107 | PANTHER:PTHR33107:SF5 | InterPro:Prot_inh_Kunz-lg | SMART:SM00452 | SUPFAM:SSF50386 |
| SignalP:SignalP-noTM | UniParc:UPI0002963B43 | RefSeq:XP_015164232.1 | SEG:seg | : | : |
Description
Lemir [Source:PGSC_GENE;Acc:PGSC0003DMG400026966]
Coordinates
chr6:-:52980663..52981271
Molecular Weight (calculated)
18999.0 Da
IEP (calculated)
8.681
GRAVY (calculated)
-0.136
Length
168 amino acids
Sequence
(BLAST)
(BLAST)
001: MKNLLLILLL STFINSWLSE ASSAPEPVLD INGKILRTHT TYYIVPTNRE NGGLSVETIG NETCQLGVVK EKYDKNGAIL EFIPVDKKKG KYFVNVGGVD
101: GNPGSKTIWN WFKIEKYGHG YKFVYCPSVC TYCKVICKDV GVYMINEQNR LALNDVPLVF NFKREFNS
101: GNPGSKTIWN WFKIEKYGHG YKFVYCPSVC TYCKVICKDV GVYMINEQNR LALNDVPLVF NFKREFNS
001: MNSGRRSLMS ATASLSLLLC IFTTFVVVSN GELQRFIEPA KSDGSVSFIV IGDWGRRGSF NQSLVAYQMG KIGEKIDLDF VVSTGDNFYD NGLFSEHDPN
101: FEQSFSNIYT APSLQKQWYS VLGNHDYRGD AEAQLSSVLR EIDSRWICLR SFVVDAELVE MFFVDTTPFV KEYYTEADGH SYDWRAVPSR NSYVKALLRD
201: LEVSLKSSKA RWKIVVGHHA MRSIGHHGDT KELNEELLPI LKENGVDLYM NGHDHCLQHM SDEDSPIQFL TSGAGSKAWR GDINPVTINP KLLKFYYDGQ
301: GFMSARFTHS DAEIVFYDVF GEILHKWVTS KQLLHSSV
101: FEQSFSNIYT APSLQKQWYS VLGNHDYRGD AEAQLSSVLR EIDSRWICLR SFVVDAELVE MFFVDTTPFV KEYYTEADGH SYDWRAVPSR NSYVKALLRD
201: LEVSLKSSKA RWKIVVGHHA MRSIGHHGDT KELNEELLPI LKENGVDLYM NGHDHCLQHM SDEDSPIQFL TSGAGSKAWR GDINPVTINP KLLKFYYDGQ
301: GFMSARFTHS DAEIVFYDVF GEILHKWVTS KQLLHSSV
Arabidopsis Description
PAP17Purple acid phosphatase 17 [Source:UniProtKB/Swiss-Prot;Acc:Q9SCX8]
SUBAcon: [golgi,extracellular,vacuole]
SUBAcon: [golgi,extracellular,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.