Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 8
- golgi 5
- plasma membrane 5
- endoplasmic reticulum 5
- vacuole 7
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Bra012567.1-P | |
| Bra013361.1-P |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G17860.1 | Bra012567.1-P | AT4G19030.1 | 21798944 |
| AT1G17860.1 | Bra013361.1-P | AT4G19030.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY19181 | Canola | extracellular | 94.79 | 94.79 |
| CDY26209 | Canola | extracellular | 89.58 | 89.58 |
| Bra016580.1-P | Field mustard | extracellular | 70.83 | 69.74 |
| AT1G17860.1 | Thale cress | extracellular | 66.15 | 64.8 |
| VIT_17s0119g00120.t01 | Wine grape | extracellular | 58.33 | 54.63 |
| VIT_17s0119g00280.t01 | Wine grape | extracellular | 54.17 | 51.23 |
| VIT_17s0119g00150.t01 | Wine grape | extracellular | 53.65 | 50.74 |
| VIT_17s0119g00180.t01 | Wine grape | cytosol | 29.17 | 47.06 |
| VIT_17s0119g00220.t01 | Wine grape | cytosol | 28.12 | 45.38 |
| PGSC0003DMT400069586 | Potato | extracellular | 47.4 | 45.05 |
| PGSC0003DMT400069587 | Potato | vacuole | 48.96 | 44.76 |
| VIT_17s0119g00160.t01 | Wine grape | cytosol, plastid, vacuole | 30.73 | 44.03 |
| Solyc06g072230.1.1 | Tomato | extracellular | 45.83 | 44.0 |
| KRH75900 | Soybean | cytosol | 20.31 | 43.33 |
| KRH38871 | Soybean | mitochondrion | 44.79 | 42.36 |
| KRH09380 | Soybean | nucleus | 44.27 | 41.67 |
| GSMUA_Achr5P19420_001 | Banana | extracellular | 47.92 | 41.44 |
| Solyc06g072220.1.1 | Tomato | extracellular | 45.31 | 41.23 |
| KRH38860 | Soybean | extracellular | 41.67 | 40.2 |
| KRH38855 | Soybean | extracellular | 41.15 | 39.7 |
| KRH09379 | Soybean | nucleus | 43.75 | 39.25 |
| KRH38870 | Soybean | endoplasmic reticulum | 42.71 | 39.23 |
| KRH38858 | Soybean | extracellular | 40.62 | 39.2 |
| KRH38857 | Soybean | extracellular | 40.62 | 39.2 |
| KRH09376 | Soybean | extracellular | 39.58 | 38.0 |
| KRH38856 | Soybean | extracellular | 36.98 | 37.77 |
| KRH38868 | Soybean | endoplasmic reticulum | 42.19 | 37.5 |
| GSMUA_Achr1P01860_001 | Banana | extracellular | 39.06 | 37.5 |
| KRH38862 | Soybean | endoplasmic reticulum | 41.15 | 37.44 |
| KRH09377 | Soybean | endoplasmic reticulum | 38.54 | 36.82 |
| KRH38861 | Soybean | extracellular | 41.15 | 36.74 |
| VIT_17s0119g00240.t01 | Wine grape | cytosol, extracellular, vacuole | 49.48 | 36.54 |
| KRH38863 | Soybean | endoplasmic reticulum | 40.62 | 36.28 |
| KRH38869 | Soybean | golgi, plasma membrane, vacuole | 40.1 | 36.15 |
| Os04t0526600-01 | Rice | extracellular | 34.9 | 33.5 |
| KRH75892 | Soybean | cytosol, extracellular, vacuole | 26.04 | 33.11 |
| Zm00001d002960_P001 | Maize | extracellular | 23.44 | 29.61 |
| TraesCS2B01G392500.1 | Wheat | golgi | 29.69 | 28.22 |
| TraesCS2D01G371800.1 | Wheat | extracellular | 29.69 | 28.08 |
| TraesCS2A01G375400.1 | Wheat | extracellular, vacuole | 29.69 | 28.08 |
| HORVU2Hr1G090750.1 | Barley | extracellular | 17.71 | 27.87 |
| KXG23922 | Sorghum | extracellular | 28.12 | 24.88 |
| EES12537 | Sorghum | vacuole | 29.69 | 24.78 |
| VIT_17s0119g00230.t01 | Wine grape | nucleus, vacuole | 51.56 | 4.73 |
| VIT_00s0207g00030.t01 | Wine grape | extracellular, nucleus | 0.52 | 0.08 |
Protein Annotations
| Gene3D:2.80.10.50 | MapMan:35.1 | EnsemblPlantsGene:Bra025942 | EnsemblPlants:Bra025942.1 | EnsemblPlants:Bra025942.1-P | GO:GO:0003674 |
| GO:GO:0004866 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0010951 | GO:GO:0019538 |
| GO:GO:0030234 | MEROPS:I03.030 | InterPro:Kunitz_inhibitor_STI-like_sf | UniProt:M4EAY3 | PFAM:PF00197 | PRINTS:PR00291 |
| PANTHER:PTHR33107 | InterPro:Prot_inh_Kunz-lg | SMART:SM00452 | SUPFAM:SSF50386 | SignalP:SignalP-noTM | UniParc:UPI000253F374 |
Description
AT1G17860 (E=4e-082) | trypsin and protease inhibitor family protein / Kunitz family protein
Coordinates
chrA06:+:6866552..6867130
Molecular Weight (calculated)
21385.8 Da
IEP (calculated)
7.681
GRAVY (calculated)
-0.060
Length
192 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSLLYISLL LAVFISHTTE AALEPVTDID GGRLTSGTKY YILPVLRGRG GGLTMSKPEN KTCPKSVIQD PYEVSKGLPV EFSPSDNSRI IRVSTDLNFK
101: FCAASVWNLD NYDETTNQWF VTACGVAGNP GQATVDNWFK IEKYEDDYKI VFCPTVCNFC KVMCRDVGVF VQDGKRRLVL SDVPLKVMFK KA
101: FCAASVWNLD NYDETTNQWF VTACGVAGNP GQATVDNWFK IEKYEDDYKI VFCPTVCNFC KVMCRDVGVF VQDGKRRLVL SDVPLKVMFK KA
001: MSSLLYIFLL LAVFISHRGV TTEAAVEPVK DINGKSLLTG VNYYILPVIR GRGGGLTMSN LKTETCPTSV IQDQFEVSQG LPVKFSPYDK SRTIPVSTDV
101: NIKFSPTSIW ELANFDETTK QWFISTCGVE GNPGQKTVDN WFKIDKFEKD YKIRFCPTVC NFCKVICRDV GVFVQDGKRR LALSDVPLKV MFKRAY
101: NIKFSPTSIW ELANFDETTK QWFISTCGVE GNPGQKTVDN WFKIDKFEKD YKIRFCPTVC NFCKVICRDV GVFVQDGKRR LALSDVPLKV MFKRAY
Arabidopsis Description
KTI2Kunitz trypsin inhibitor 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LMU2]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.