Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 6
- mitochondrion 2
- plasma membrane 1
- nucleus 1
- vacuole 1
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G02725.1 | KRH11076 | AT4G19030.1 | 21798944 |
| AT4G02725.1 | KRH21197 | AT4G19030.1 | 21798944 |
| AT4G02725.1 | KRH42923 | AT4G19030.1 | 21798944 |
| AT4G02725.1 | KRH42926 | AT4G19030.1 | 21798944 |
| AT4G02725.1 | KRH45251 | AT4G19030.1 | 21798944 |
| AT4G02725.1 | KRH59035 | AT4G19030.1 | 21798944 |
| AT4G02725.1 | KRH59036 | AT4G19030.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra018531.1-P | Field mustard | cytosol, plastid, vacuole | 41.57 | 71.13 |
| Os03t0701300-00 | Rice | cytosol, vacuole | 41.57 | 69.7 |
| VIT_07s0151g00950.t01 | Wine grape | plastid | 58.43 | 57.4 |
| CDY22076 | Canola | plastid | 51.2 | 53.12 |
| CDY21914 | Canola | plastid | 51.2 | 52.8 |
| CDX91314 | Canola | plastid | 51.81 | 51.81 |
| CDX97285 | Canola | plastid | 51.81 | 51.81 |
| Bra036243.1-P | Field mustard | plastid | 37.35 | 50.0 |
| AT4G02725.1 | Thale cress | plastid | 49.4 | 49.7 |
| GSMUA_Achr4P16580_001 | Banana | plastid | 52.41 | 48.6 |
| HORVU4Hr1G006090.1 | Barley | plastid | 47.59 | 46.2 |
| PGSC0003DMT400049761 | Potato | plastid | 42.77 | 45.81 |
| TraesCS4B01G038700.1 | Wheat | plastid | 48.19 | 45.2 |
| TraesCS4D01G035600.1 | Wheat | plastid | 48.19 | 44.94 |
| Solyc09g065300.2.1 | Tomato | plastid | 55.42 | 44.02 |
| TraesCS4A01G275200.1 | Wheat | plastid | 46.99 | 43.82 |
| OQU91145 | Sorghum | plastid | 46.99 | 43.58 |
| Zm00001d033634_P001 | Maize | plastid | 46.39 | 41.85 |
Protein Annotations
| EMBL:ACUP02002047 | EnsemblPlants:KRH67228 | EnsemblPlantsGene:GLYMA_03G155200 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0009507 | GO:GO:0009536 | GO:GO:0016020 | GO:GO:0016021 | PANTHER:PTHR36046 |
| ProteinID:KRH67228 | ProteinID:KRH67228.1 | SEG:seg | TMHMM:TMhelix | UniParc:UPI00023C22A0 | UniProt:K7KF98 |
| MapMan:35.2 | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr3:+:37045316..37047743
Molecular Weight (calculated)
18713.1 Da
IEP (calculated)
7.054
GRAVY (calculated)
-0.184
Length
166 amino acids
Sequence
(BLAST)
(BLAST)
001: MRAVLVSVLP LPPSHRLSTQ NHNPNSHLRF PSSSSVTSST SSNRTIVFGV NPSDSKKDPS FFDENGAVND MEGYLNHLSL EYDSVWDTKP SWCQPWTIAL
101: TGVSIIAISW LILHSVIITS LISSLICAWW YIFLYSYPKA YSDMIAERRE RVTNGVEDTF GQKKNQ
101: TGVSIIAISW LILHSVIITS LISSLICAWW YIFLYSYPKA YSDMIAERRE RVTNGVEDTF GQKKNQ
001: MASLSMSAVS LSPFRPQTEN LLSKLSFRTN LHSFNLKPIR ISTKVRSFGG NRREPKDSRF VDEKGVVDDM EGFLDNLSLE YDSVWDTKPS WCQPWTIMLT
101: GLSIVACSWV ILHSVIVSSL AVGVIGAWWY IFLYSYPKSY SEMIAERRKR VADGFEDIYG KNKPS
101: GLSIVACSWV ILHSVIVSSL AVGVIGAWWY IFLYSYPKSY SEMIAERRKR VADGFEDIYG KNKPS
Arabidopsis Description
At4g02725 [Source:UniProtKB/TrEMBL;Acc:Q6DBF6]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.